Gene Gdia_0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0827 
Symbol 
ID6974224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp939409 
End bp941031 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content64% 
IMG OID643390356 
Productcytochrome c oxidase, subunit I 
Protein accessionYP_002275232 
Protein GI209543003 
COG category[C] Energy production and conversion 
COG ID[COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 
TIGRFAM ID[TIGR02891] cytochrome c oxidase, subunit I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.541437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.274424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAA GCTATCTCTG GCAGGACGGA ACCCTGCGAT CCTGGCTGCT GACGCGTGAC 
CACAAGCGGA TCGGCCTGCT CTATCTGGGC TCGATCACCG CCTTCTTCGT GCTGGGCAGC
GTCGGGGCGG CGCTGGTGCG GCTGCAGTTG CTGGAACCGA ACGGCACCAT CCTGTCCGAT
GCGACCTATA ACCGGATGTT CACCATGCAT GGCGTGGTGA TGGTCTGGCT GTTCCTGGTG
CCGTCGATTC CGGTCACGCT GGGGAACTTC CTGGTCCCGC TGATGCTGGG CGCCCGCGAC
CTTGCGTTTC CGCGCCTCAA CCTTATCAGT TGGTACCTGT TCGTCGCGTC GGGCCTGCTG
GTGGTCTACG GGCTGTTCCG GGGCGGCCTG GAAACCGGCT GGACGTTCTA TACCCCGCTT
TCGTCGGATT ATACCGAGGG CCGGGTACTG CCGGTCGTGC TGGGTATCTT CCTCAACGGG
TTTTCCTCGA TCGCGACGGG GGTGAACTTC ATCGTCAGCA TCCATCAGCT TCGCGCGCCG
GGCATGACGT GGTACCGCCT GCCGCTGATG CTGTGGGCGC TGTATGCCAC CAGCGTCATC
TTCGTACTGG CGACACCGGT CCTGGGCATC ACGCTGCTGC TGCTGGCGTT CGAACGCCTG
TTCCACGTGG GCGTGTTCGA CCCGACGCTG GGCGGCGATC CGCTGCTGTT CCAGCAGATG
TTCTGGTTCT ACTCCCACCC CGCCGTCTAC ATCATGATCC TGCCCGGCAT GGGCGTGGTC
AGCGAAATCG TCAGCACGTT CTGCCACAAG CCGGTGTTCG GCTACCGCTT CGTGGCATGG
TCGTCGGTCT CGATCGCGGC GATCGGCTTC ATCGTGTGGG GGCACCACAT GTTCGTCGCC
GGAACGTCGC TCTATTCCGC CATCGTCTTT TCGATGTTCA GCTTCTTCGT CTCGGTCCCG
TCGGCCATCA AGGTCTTCAA CTGGCTGGGC ACGATGCATG GCGGTTCCAT CCGCCTGGAC
GCCCCGATGC TGTATGCGAT GGGCTTCATC GGCCTGTTCA CCGTGGGCGG CCTGACCGGC
CTGTTCCTGG CCTCGCTGGC CGCCGACGTG CATCTGACGC AGACCTATTT CGTGGTCGCG
CATTTCCACT ACATCATGGT CGGCGGCATG GTATCGGCCT ATTTCGGCGG CCTGCATTAC
TGGTGGCCCA AGATCACGGG CCGGATGTAC CCCGAAATGT GGGGACGCCT GGCGGCCGCC
CTGATCTTCT TCGGCTTCAA CCTGACCTTC TTCCCCCAGT TCATCCTGGG GTTCGAGGGC
ATGCCCCGCC GCTATGCCAC CTATCCCGCG CAGTTCCAGG TCCTGAACGT GCTGTCCTCG
GCCGGGGCGA GTATCCTGGC CGTCGCCTAT GCGATGCCGC TGGTCTATTT CACCTGGTCG
CTGTTTCGCG GCGCCCGCGC GCCCGACAAC CCGTGGGGGG CGACGGGCCT GGAATGGCGG
ACGACATCGC CCCCGCCCAC CGAGAATTTC GCCGTGACAC CGGTCGTGAC CACCGACGCG
TACGATTACG CGGACCTGGA TGCCCATGCC GGGCTGGCGG ATACGGGGGT GCCGCATGTC
TGA
 
Protein sequence
MSESYLWQDG TLRSWLLTRD HKRIGLLYLG SITAFFVLGS VGAALVRLQL LEPNGTILSD 
ATYNRMFTMH GVVMVWLFLV PSIPVTLGNF LVPLMLGARD LAFPRLNLIS WYLFVASGLL
VVYGLFRGGL ETGWTFYTPL SSDYTEGRVL PVVLGIFLNG FSSIATGVNF IVSIHQLRAP
GMTWYRLPLM LWALYATSVI FVLATPVLGI TLLLLAFERL FHVGVFDPTL GGDPLLFQQM
FWFYSHPAVY IMILPGMGVV SEIVSTFCHK PVFGYRFVAW SSVSIAAIGF IVWGHHMFVA
GTSLYSAIVF SMFSFFVSVP SAIKVFNWLG TMHGGSIRLD APMLYAMGFI GLFTVGGLTG
LFLASLAADV HLTQTYFVVA HFHYIMVGGM VSAYFGGLHY WWPKITGRMY PEMWGRLAAA
LIFFGFNLTF FPQFILGFEG MPRRYATYPA QFQVLNVLSS AGASILAVAY AMPLVYFTWS
LFRGARAPDN PWGATGLEWR TTSPPPTENF AVTPVVTTDA YDYADLDAHA GLADTGVPHV