Gene Gdia_0818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0818 
Symbol 
ID6974215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp931887 
End bp932645 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content67% 
IMG OID643390347 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002275223 
Protein GI209542994 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.100065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCG TTTCCGGAAA AGTGGCGATC GTCACGGGGG CGTCCCGTGG GATCGGCAAG 
GCCACCGCCC TGATGCTGGC CCGCGAGGGC GCGCGCGTCG CCGTCGCCGA CCTGAAGGAG
GACGAGGGCC AGGCGGTCGT CGCCGAGATC GGGGCGGCGG GCGGCGAGGC CCTGTTCGTG
CCGCTGGACG TCAGCAGCGA GGACGCCTGG ACCCAGGCCA TGGCGGCGGT GACGGGCCGG
TTCGGCCGGC TGGACATTGC CGTCAACAAT GCCGGCATCG CGTTTTCCGG CACCGTGGAA
AGCACGGACC TGGCCGAATG GCGCCGCGTG CAGTCGATCA ACCTGGACGG GGTGTTCCTG
GGCACCAAGT TCGCCGTCGC GGCGATGAAG GATCATGGCG GGTCGATCAT CAACCTGTCG
TCGATCGAAG GGCTGATCGG CGATCCGACG CTGGCGGCGT ACAATGCCAG CAAGGGCGGC
GTACGGCTGT TCACCAAGTC GGCGGCGCTG CACTGCGCGC GCTCGGGCTA CAAGATCCGG
GTCAATTCCG TCCATCCGGG CTATATCTGG ACACCGATGG TCCAGGGCCT GACCGCCGAC
CAGGCCGCCG CCCGCGAAAA GCTGGTGGCG CTGCATCCGA TCGGCCATCT GGGCGAGGCC
GACGACATCG CCTACGGCAT TCTTTACCTT GCCTCGGACG AATCCAAATT CATGACCGGC
AGCGAACTGG TGATCGACGG CGGCTACACC GCGCAGTAA
 
Protein sequence
MARVSGKVAI VTGASRGIGK ATALMLAREG ARVAVADLKE DEGQAVVAEI GAAGGEALFV 
PLDVSSEDAW TQAMAAVTGR FGRLDIAVNN AGIAFSGTVE STDLAEWRRV QSINLDGVFL
GTKFAVAAMK DHGGSIINLS SIEGLIGDPT LAAYNASKGG VRLFTKSAAL HCARSGYKIR
VNSVHPGYIW TPMVQGLTAD QAAAREKLVA LHPIGHLGEA DDIAYGILYL ASDESKFMTG
SELVIDGGYT AQ