| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0802 |
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| Symbol | |
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| ID | 6974199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 912267 |
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| End bp | 914585 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643390331 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002275207 |
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| Protein GI | 209542978 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.185981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.624417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGA AATCGATCTG CGCCGGAATT GCGACGTTCC TGTCGGTGCG CACCGGTAAC
CCCGAACTGC TGAAGGCGCA ATTCGCGGCG CTCTCGCGCC TTATCCCGCT GATGTATTTC
ATCCTGGTGG CCGATGCCTG GGTCCTGGCC GGGACCTTCA TCCATCGGGC GCCGCTGTGG
CTGACCCTGT ATGCGTCCCT GCTGCTGACC GCCATATGCC TGTCGCGCCT GGTCGTGTGG
TGGAAGAAGA GAAACGTCGC GTTGACGGTG GAAACGGCCT TCGCGGAACT GCGACGCGCC
AATCGCGTGG CCGCGGCCCT GACGGTGGTC TTTCCGGCCT GGGCATTCGC GCTGTTTTCC
TATGGCGACG CGCTGGAACA GAGCCACGTC GCGTTCTTCC TGGTGATTTC CATCCTGGGC
ACGATGTTCT GCCTGATCCA CCTGCGCTCG GCCGCCCTGA TCGTCGCCGC TGTCGCCGGG
AGCGCCTTCG TGGTCTTCTT CGCTTCGACG GGACAGCCCG TGTTCATCGG CATGGCGGTC
AACGTCGTGT TCGTGATCGG GGCCTCGGTG GTCGTGGTGC TGATCCAGAA CCGCGACTTC
GTCCGCATGG TCAACGCGTC GATCGCGGCA CGGTCCAAGG AACAGGCGCA GAACCGGCTG
CTGCGCATGA TCGACGACAT GCCGGTCGCG GTGATGACGG TCGAACCCGA TACGCTGAAG
ATCAATTACG TCAACGAGAC CTCGAAACGC CTGGTCCGGC GGATCGAGCA CCTGCTGCCG
ATCAAGGCCG ACGACCTGCC GGGCACCTGT ATCGACGTCT TTCACAGGCA CCCGCAACAC
CAGCGCCGGA TTCTGGGCGA CCCCGCGAAC CTTCCGCACA ATGCCCGCAT CAGCCTCGGT
CCCGAGGTCA TCGACCTGAA GGTTTCCGCC GTCACGGACA CGGACGGGAC GTATATCGGC
CCCATGCTGA CCTGGGCGCT CGTGACCAAG GAGGCGGAGT CCGAACGGCG CATCTTCCAG
ATGGCCCATT ACGACATCCT GACCGGGCTT CCGAACCGCA TCACGTTCCA CGAGGAACTG
GACAAGCGCC TGGGCACGCC CGGGAACCGG GTCGGACTGC TGTTCGTGGA TCTGGACGGC
TTCAAGCTGG TGAATGATAC AAGGGGGCAT CGGATCGGCG ATATCCTGCT CACCCAGGTG
GCAAGCCGCC TGCGCGCGAC GTGCAACAGC CCGGCGACCG TCGTCGGACG GCTGGGAGGG
GACGAGTTCG CCGTCCTCGT TCCGCACGAC AACGCGGAAG AGGCCGCGTT GCTGGCCGCG
CGTGTCGTCG CCTTCCTGAG CGAGCCCTAT GACCTCGATT ACGACCGGAG CATCCAGATC
ACCGCGTCCG TCGGCATCGC CCTGGCGCCG CTCCATGGCG AGGACGGGGA AACGCTGCTG
AGCCGGGCGG ATATCGCCCT CCATGTGGCC AAGACCGCCG GAAAGGGAGA GTTCCGGATG
TTCCAGCCCG AGATGGAGGC CCGCATCCAG GAGCGTATGC GCCTGGAAGC CAGGCTGCAG
GCTACGCTGA AAAGCGAGGA GGGGCTGTTC GTCTTCTACC AGCCGATCAT CGGCATCGAC
AGCGGCACCG TGACGGCCCG CGAAGCCCTG GTGCGGTGGT ACCATCCCGA GCGCGGCTGG
ATTTCGCCCG GCGAGTTCGT GCCGGTGGCC GAGCAAAGCG GCCTGATCGA CCAGCTCGGC
GGTTTCGTGC TGAATACGGC CTGCCGCGAC GCGGCCCGCT GGACCGATGG CGCGCGCGTC
GCGGTGAATA TTTCCGCCAG CCAGATCGGC AAGGGAACGC TCGTCCCGTC CATCCTCGCA
GCCCTGGAGG CCTCCGGCCT GCCGCCCGAG CGGCTGGAAA TCGAGGTGAC CGAAACGGCC
CTTCTCTACG ACGAACGGGA TACGACCGCC GAACTGCAGC AATTGCGGAA CCTGGGCGTC
CGGGTGGCGC TCGACGATTT CGGGACGGGC TATTCCTCGC TGGCCCATCT GCGGGCCTTC
CCGTTCGACA AGATCAAGAT CGACGGCTCG TTCGTGCGCG ATGCCGTCGA CCGGCCCGAC
TGCGCCGCCG TGGTTCAGGT GGTGGCCAGC CTGGGCAAGC GTCTGGGCGT GACCACGGTT
GCCGAGGGTG TCGAAACCCA GGCCCATCTC GACCGGGTCC GCGAGGAAGG CTGCACCGAG
GTCCAGGGCT ACCTTTTCGG CCGGCCCAAG CCGGACGAAC GGGACGCCCC GCTGGTCGAG
GAACTGAACC GGCGGGCGCG CGAAGCCGCG ACGGCCTGA
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| Protein sequence | MNPKSICAGI ATFLSVRTGN PELLKAQFAA LSRLIPLMYF ILVADAWVLA GTFIHRAPLW
LTLYASLLLT AICLSRLVVW WKKRNVALTV ETAFAELRRA NRVAAALTVV FPAWAFALFS
YGDALEQSHV AFFLVISILG TMFCLIHLRS AALIVAAVAG SAFVVFFAST GQPVFIGMAV
NVVFVIGASV VVVLIQNRDF VRMVNASIAA RSKEQAQNRL LRMIDDMPVA VMTVEPDTLK
INYVNETSKR LVRRIEHLLP IKADDLPGTC IDVFHRHPQH QRRILGDPAN LPHNARISLG
PEVIDLKVSA VTDTDGTYIG PMLTWALVTK EAESERRIFQ MAHYDILTGL PNRITFHEEL
DKRLGTPGNR VGLLFVDLDG FKLVNDTRGH RIGDILLTQV ASRLRATCNS PATVVGRLGG
DEFAVLVPHD NAEEAALLAA RVVAFLSEPY DLDYDRSIQI TASVGIALAP LHGEDGETLL
SRADIALHVA KTAGKGEFRM FQPEMEARIQ ERMRLEARLQ ATLKSEEGLF VFYQPIIGID
SGTVTAREAL VRWYHPERGW ISPGEFVPVA EQSGLIDQLG GFVLNTACRD AARWTDGARV
AVNISASQIG KGTLVPSILA ALEASGLPPE RLEIEVTETA LLYDERDTTA ELQQLRNLGV
RVALDDFGTG YSSLAHLRAF PFDKIKIDGS FVRDAVDRPD CAAVVQVVAS LGKRLGVTTV
AEGVETQAHL DRVREEGCTE VQGYLFGRPK PDERDAPLVE ELNRRAREAA TA
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