| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0801 |
|---|
| Symbol | |
|---|
| ID | 6974198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 910847 |
|---|
| End bp | 912175 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643390330 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002275206 |
|---|
| Protein GI | 209542977 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.469185 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTCTT CCACGGAGAT GCATGTGACG CAGCAGCCCG GTCCGACCGA TGCCGATCGT
GGCCGGCGCT TTTGGCAGAC ACGCAATTTC ATCCTGTTTT TCGTTGCCAC CAGTGCCTCG
ACGCTGGGAT CGGCCATGGT ATCGGTCGCG TTGACGTTCG CGGTGCTGTC GCACGGGCAT
TCGGCATCGA TCCTGGGCCT GGTCCTGGCC GCGCAGGCGG CCCCGGTCGT GGTGCTGATG
GTTCCGGCGG GGGCGATCGC GGACCGGTGG GTGCGGCGGT CCCTGATGGT GGGCGCGGAC
CTGCTGCGCT GTGCCAGCCA GGGTCTGACC GCGATCCTGA TGGCGGGTGC CCATCCCTCG
GTCGCCGTGC TGATCGGCCT GGTCACGCTG GTCGGGGTCG GCAACGCATT CTACGGCCCT
GCGGAAAGCG GCCTGATTCC GGTTCTGGCG CGGCCCGAGG ATCTGCGCCG CGTCAACAGC
CTGCTCAGTC TTTCCGGCTC GATCACCGCG ATACTGGGGC CGTCGCTGGG CGGCATGCTG
GTTGCGATCG GCAGCGCACC GATCGCGATC GGCTGCGACG CGGTGACCTA TGCCATCAGC
GCCATCTGCC TGACGGCGAT AAGTACCCTG CGCCCGGCGC GCCGGGCGAC CGCACCGTTC
CAGACCCAGT TGCTGGCCGG CCTGCGCGAG TTCCATCAGC GGCGATGGCT GATCCTTATG
ACGGCGCAAT ACGGGTTCCT GAATCTGGCG GCGTTCGCGC CGTTCCTGAT CCTCGGCCCC
GTCTCACTGG CCCATGTGGT GCGTGGCGCC CAGTCCTGGG GCATCATTTC CTCGGCCATC
GGCATCGGCG GCATTTTCGG TGGGGGCGTC AGCCTGTTCT GGCATGTTTC CCGTCCGTTG
GTGCTTTATG AAACGGCGGC TGCCGTCCTG GTGATTCCGC TGGTCCTGCT GGCCGCGCAG
GCGTCGGTTC CCTACCTGGC CCTGGGCGGC GTCGCCTTTG GCGCGGGGAT CGTGATCCTG
AACCTGGTCG CGCAGACCAC CATTCAACGG CAGGTGCCCG AGGAGGCGTT ATCGCGGATC
AACGCCCTGT TCGGCCTGGT CGCGCAAGGC CTGACACCGC TGAGCTACGC CATGTGCGGC
TTCCTGGCCC GTGCGGTCGG CATAAAGCCT GTTCTGGCGG CCAGCAGCGT CGTGGTCGGG
GTCAGCGTCG TGGTCCTGCT GATGCGCAGG GAAACCTGGG ACCTGCGGGA TGCGCCGGCC
GTCGCCGACG GCCGAAGTCA GGATAAGGGG GGCAGGACAA GGGGTCAGGA TAACCGGTCC
AGCCGGTAG
|
|---|
| Protein sequence | MGSSTEMHVT QQPGPTDADR GRRFWQTRNF ILFFVATSAS TLGSAMVSVA LTFAVLSHGH
SASILGLVLA AQAAPVVVLM VPAGAIADRW VRRSLMVGAD LLRCASQGLT AILMAGAHPS
VAVLIGLVTL VGVGNAFYGP AESGLIPVLA RPEDLRRVNS LLSLSGSITA ILGPSLGGML
VAIGSAPIAI GCDAVTYAIS AICLTAISTL RPARRATAPF QTQLLAGLRE FHQRRWLILM
TAQYGFLNLA AFAPFLILGP VSLAHVVRGA QSWGIISSAI GIGGIFGGGV SLFWHVSRPL
VLYETAAAVL VIPLVLLAAQ ASVPYLALGG VAFGAGIVIL NLVAQTTIQR QVPEEALSRI
NALFGLVAQG LTPLSYAMCG FLARAVGIKP VLAASSVVVG VSVVVLLMRR ETWDLRDAPA
VADGRSQDKG GRTRGQDNRS SR
|
|---|
| |