Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0639 |
Symbol | holA |
ID | 6974036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 719301 |
End bp | 720314 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643390170 |
Product | DNA polymerase III subunit delta |
Protein accession | YP_002275046 |
Protein GI | 209542817 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.858672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGATCG ACGCGCGCTC GGTCGCCCGC ATCCTGCGTG AACCCGGGGC GCTGCGCGTC ATCCTGCTGC ACGGCGACGA TTCCGGCCTG ATCCGCGAAC GCGCCCGTCT GGCCGCGACC GCCATCGCCC CGAACCTGGA CGACCCGTTC CGCGTCGCCG TGCTGGACCG CGACGCGGCG GACCGGCTGG ACGAGGAGAT CTTCGCGCTA TCCCTTGCCG GCGGCCGCCG CGTCGTCTGG GTCCGCGACG GCGGGGACAG CCTGACGGCC CCGCTGAAGG CCAGCCTGGC CCGGCCATCG GATACGCTGG TGATCGTCGA GGCCCCGGGC CTGGCCTCGC GCGCGCGCCT GCGCGCGCTG GCCGAGGCGC AGGCCGATTG CGCCGCCATC GCCTGCTACC CCGAGGAAGG CCGCGCGCTG GAAGCCTCGA TCCGCCAGAT GCTGGCGGAA GAGGACATTC GCATCGATCC CGACGCCCTG TCCTGGTTCG CCGGCCTGCT GGGACCGAAC CGGGCCGCGA CACGAGGCGA GGTCGAGAAG CTCGCCCTCT ATGCCGGGCG GGGCGGCCAG CTCTCGCTGG ACGACGTGCG GATGTGCATC GGGGACGCGG CGGGCGTGTC GCTGGAAGAC GCGGCCTTCG CCGCGACAGC GGGCGACCGG GCCGGCGCGG ATATCGCGAT CGAGCGCGCG CTGGCCGAGG GCACCAGCCC GATCGCGGTC GCCCGGTCGC TGCTGTCGCA CCTGCACCGG CTGCGGCGCG CGCGAATCGC CATGGATGGC GGCCAGAGCC GCGCCGACGC CATGCGCGGC CTGCGCCCGC CCGTCTTCTT CAAGCGGACC GATGCCTTCG GCCAGGCCCT TTCCCTGTGG ACGGCCGCCC GCCTGATGGA GGCCGCCGAA CAGACCCAGC GCCTGGAACT GGAGTGCAAG CAGACCGGCG CCCCGGACCT CGCGCTCTGC CGCCGCCATA TCGCGCGCCT GGCCGCGACC GCGATGGCGG GGCGCCGCCG GTGA
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Protein sequence | MKIDARSVAR ILREPGALRV ILLHGDDSGL IRERARLAAT AIAPNLDDPF RVAVLDRDAA DRLDEEIFAL SLAGGRRVVW VRDGGDSLTA PLKASLARPS DTLVIVEAPG LASRARLRAL AEAQADCAAI ACYPEEGRAL EASIRQMLAE EDIRIDPDAL SWFAGLLGPN RAATRGEVEK LALYAGRGGQ LSLDDVRMCI GDAAGVSLED AAFAATAGDR AGADIAIERA LAEGTSPIAV ARSLLSHLHR LRRARIAMDG GQSRADAMRG LRPPVFFKRT DAFGQALSLW TAARLMEAAE QTQRLELECK QTGAPDLALC RRHIARLAAT AMAGRRR
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