| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0589 |
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| Symbol | |
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| ID | 6973986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 657134 |
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| End bp | 660163 |
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| Gene Length | 3030 bp |
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| Protein Length | 1009 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643390120 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_002274996 |
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| Protein GI | 209542767 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00000676969 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAAGC GCATGCTGAT CGATACGACC CACGCGGAAG AAACCCGCGT GGTCGTAATG
GATGGTAACA GGCTCGAAGA CTACGACGTC GAGGCATCGG CCAAGAAACA GCTCAAGGGC
AATATCTACC TGGCCAAGGT GATCCGGGTC GAGCCCAGCC TGCAGGCCGC CTTCGTCGAA
TATGGCGGGA ACCGCCACGG CTTCCTGGCC TTCAGCGAGA TCCATCCGGA CTATTACCAG
ATCCCCGTCG CGGATCGCGA GAAGCTGCTG GCCCTTCAGG AAGAAGAGGC CCGCATCGAC
GAGGCGCAGT CGCAGGACGA CGACGCCGAG GCGCCGGCCG AGCCCGCCGC CGCCGATGCC
CAGGCCGATG GCGACGCCCA GGCCGCCGAC GGCGAGGCCG AGCCGCTGCC GGAAACCGTG
GGCGGCGAGA CCGACACGGG CGACGAGAGC CTGGTCCAGC GCCGCATCGC CCGCTTCCTG
CGCAACTACA AGATCCAGGA GGTCATTCGC CGCCGCCAGA TCCTGCTGGT GCAGGTCGTC
AAGGAAGAGC GCGGCAACAA GGGCGCGGCG CTGACCACCT ATATCTCGCT GGCCGGGCGC
TATTGCGTGC TGATGCCCAA TTCGCTGCGC GGCGGCGGGG TATCGCGCAA GATCACGTCG
GTGGCCGACC GCCGCCGGCT GAAGGACGTG ATCGCGGAAC TGCAGATCCC GCGCGGCATG
GCGATGATCG TCCGCACCGC CGGCGCCCAG CGGCCGCGGC CCGAGATCAT GCGCGACTGC
GAGTACCTGC TGCGGCTGTG GGACGACATC CGCGACCACA CGATGCATTC CGTCGCCCCC
GCGCTGATCT ATGAAGAAGC CAGCCTGATC AAGCGCGCCA TCCGCGACAT CTATACCCGC
GATGTGGGCG AGATCCTGGT CGACGGCGAG GCCGGATGGA AATCGGCGCG CGAATTCATG
CGCATGCTGA TGCCGCAGAG CGCGCCGAAG GTGAAATGCT GGCGGGACGG CGGCCAGCCG
CTGTTTTCGC ACTTCAATGT CGAGGGCCTG CTGGACTCGA TGCTCTCCCC CACGGTGCAA
CTGCGCTCGG GCGGGTATCT GGTCATCAAC CAGGCCGAGG CCCTGGTCGC GATCGACGTC
AATTCGGGCC GCGCGACGCG CGAGCGCAAT ATCGAAGAGA CGGCGCTGCG CACCAACCTG
GAAGCGGCCG AGGAAGTGGC GCGGCAACTG CGCCTGCGCG ACCTGGCCGG ACTGATCGTC
ATCGATTTCA TCGATATGGA AAGCCGCAAG CACAACGGGA TGGTCGAGCG GCGGCTGAAG
GACGCGCTGC GCACCGACCG CGCGCGCATC CAGGTCGGCG CGATCTCGCA TTTCGGGCTG
CTGGAAATGT CGCGGCAGCG GCTGCGCCCG TCGATCGCTG AATCGACCTT CACCCCCTGC
CCGCACTGCC AGGGCACCGG CATCATACGC GGCACTGAAA GTGCGGCCCT GCATGTGCTG
CGCGCCGTCG AGGAAGAGGG CGCGCGCCGT CGCGCGGCCG AGATCACGGT GCATGTGGCC
GCCGAGATCG CGCTCTATAT CCTGAACAAC AAGCGGGCCT GGCTGAGCGA GATCGAAAAG
CGGCACAAGA TGCATGTCGT CTTCTCGCCC GATGCCAGCC TGCTGCCGCC GCAGCTTCGC
ATCGAGCGCG TACGGCCGCA GACCGAACGG TTCGAGCCCG TCGCGCCGCC GGTGCTGGCC
GAACCGACCG ACATCCTGGC CGAGGAGACC GAAGCCGCCG CGCCCGTCGT GCGCGAAATC
CCGATCCAGG CCGAAGCCCC GGCCGATGCG GCCGTCGCAG CCGAGGCCGC GCCGGTTTCC
ACCGAGGAAG GCGAGGAAGG AACCGATCAT CGCCGCCGCC GCCGGCGGCG CCGTCGCCGG
CGTGGCGGCG AGCGGGCCGA GGGTGCGCCC CAGGCCGTGC CGGCCGAAGC CGCCGATGCG
GAACAGGCGG ACGAAGACGC CGGACATGGG AACGAGGGCG AGGAAGAGAC CGTGCCCACC
ATCCATGCCG AGAGCGTGCC CGAGCCCGCG CCGGCCCGTG AAGAGGGCGG ACGCGACCGC
AATCGCCGCC GCCGTGACCG GCAGGACCGC CGTCCGGCAC AGCCGGCCGC CCCGCCGGCG
CAGGCACCGT ATCGCGGCCC GACGCCGGCC AATCCGTTCG GCGACGGCAT CCTCGATATT
TTCGATGTGA TCGAGCAATC GACCGAGGCC CCGCAGGCCC CTGTCCGGCG GCCCGAGCCG
AATGCGATGC CGGCCGACAT CGTCGACGTC GCCGAGACGC TGGCCGTGTC GGAACCCGAG
GCGGTCCCCG CGATCGTCGA AGCCGAAATC GTGATCGAGG CCGCCCCCGT GGAAGCCGCG
CCGGTCGAGG CTGAACCTGT TGAGGTCGAG GCCGAGACGG TCGAAACCCC GGCCAAGCCC
CGCCGCCGCA CCCGCGCCCG CAAGAGCGCG GTGGCCGAGG CCATGACGGC CGAGGCCCCG
GACAGCACGA CGGAGCCCGC GCCCGTTGCC GCCGAGGCTG AAGAACCGGC CAAGCCCAAG
CGTCGCCGCG CGGCGACGCC GCGCAAGACG GCCGCCAAGG CAGCGGCGGA AGAGCCGACC
GTTGCCGACA GCGCGCCCCC GGCGACAGCC GAGGCCGTAC CCGCCGAGGA TGCGGCCGAA
GCGGCACCGA AGAAGCCGAC CCGCAAGCGG ACCACGCGGG CGACCACCAC GACCCGCGCC
CGCAAGGCCA AGCCGGCCGA GGACGCCGCA ACCGAGGCTG ATGCCACCGA GGCGGCCGAA
CCGGCCCCCG AGGCCCCGGC CAAGCCGCGC CGCACGCGCA AGGCCCCTGC CCGCGCCAAG
GCAGCGGCGA AGCCGCAGGC GGAAGCGGAA GCCGAGGCCA CGGCCGAAGC GACCCCGGAA
GCCGAAAAGA CGGCCCCGGT GGTACAGCCG ATCGTCATCG ACGATTCCAA ACCGGCCCCG
GCCCGCAAGA CCGGCTGGTG GCGCCGCTGA
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| Protein sequence | MNKRMLIDTT HAEETRVVVM DGNRLEDYDV EASAKKQLKG NIYLAKVIRV EPSLQAAFVE
YGGNRHGFLA FSEIHPDYYQ IPVADREKLL ALQEEEARID EAQSQDDDAE APAEPAAADA
QADGDAQAAD GEAEPLPETV GGETDTGDES LVQRRIARFL RNYKIQEVIR RRQILLVQVV
KEERGNKGAA LTTYISLAGR YCVLMPNSLR GGGVSRKITS VADRRRLKDV IAELQIPRGM
AMIVRTAGAQ RPRPEIMRDC EYLLRLWDDI RDHTMHSVAP ALIYEEASLI KRAIRDIYTR
DVGEILVDGE AGWKSAREFM RMLMPQSAPK VKCWRDGGQP LFSHFNVEGL LDSMLSPTVQ
LRSGGYLVIN QAEALVAIDV NSGRATRERN IEETALRTNL EAAEEVARQL RLRDLAGLIV
IDFIDMESRK HNGMVERRLK DALRTDRARI QVGAISHFGL LEMSRQRLRP SIAESTFTPC
PHCQGTGIIR GTESAALHVL RAVEEEGARR RAAEITVHVA AEIALYILNN KRAWLSEIEK
RHKMHVVFSP DASLLPPQLR IERVRPQTER FEPVAPPVLA EPTDILAEET EAAAPVVREI
PIQAEAPADA AVAAEAAPVS TEEGEEGTDH RRRRRRRRRR RGGERAEGAP QAVPAEAADA
EQADEDAGHG NEGEEETVPT IHAESVPEPA PAREEGGRDR NRRRRDRQDR RPAQPAAPPA
QAPYRGPTPA NPFGDGILDI FDVIEQSTEA PQAPVRRPEP NAMPADIVDV AETLAVSEPE
AVPAIVEAEI VIEAAPVEAA PVEAEPVEVE AETVETPAKP RRRTRARKSA VAEAMTAEAP
DSTTEPAPVA AEAEEPAKPK RRRAATPRKT AAKAAAEEPT VADSAPPATA EAVPAEDAAE
AAPKKPTRKR TTRATTTTRA RKAKPAEDAA TEADATEAAE PAPEAPAKPR RTRKAPARAK
AAAKPQAEAE AEATAEATPE AEKTAPVVQP IVIDDSKPAP ARKTGWWRR
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