Gene Gdia_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0542 
Symbol 
ID6973938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp599538 
End bp600023 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content67% 
IMG OID643390074 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_002274951 
Protein GI209542722 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000951207 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0890516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATA CCGCACCGAA AGCCGACCTG ATCGACCTGG AACTGAAGAC GGGCCGTGTG 
GTCATTCAGT TGCGTCCCGA CCTGGCGCCG CTGGCGGCCG AGCGGATCCG TACGCTGGCG
GCCGAGGGCT TCTACGACAA CACGCCCTTC CACCGCGTCA TTCACGGCTT CATGGCCCAG
GGCGGCGACC CGACCGGCAC GGGCACCAGC GGCAGCCACC TGCCCGACCT GAAGGCCGAA
TTCACCCGCG CCGCGAAGTT CGAGCGCGGC ACCATCGGCA TGGCCCGCAC GATGAACCCG
GACAGCGCGA ACAGCCAGTT CTTCATCATG TTCGAGCCCT CGCCCCACCT GGACGGCCAG
TACACGATCG TCGGCCAGGT GGTCGAAGGC ATGGAGCATA TCGACCAGAT CAAGCGCGGC
GCGGGCCAGA GCGGCACGGT GCAGGACCCG GACCGCATCA TTTCCATGCG TCCCGCCGCA
GCCTGA
 
Protein sequence
MSDTAPKADL IDLELKTGRV VIQLRPDLAP LAAERIRTLA AEGFYDNTPF HRVIHGFMAQ 
GGDPTGTGTS GSHLPDLKAE FTRAAKFERG TIGMARTMNP DSANSQFFIM FEPSPHLDGQ
YTIVGQVVEG MEHIDQIKRG AGQSGTVQDP DRIISMRPAA A