Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0542 |
Symbol | |
ID | 6973938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 599538 |
End bp | 600023 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643390074 |
Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
Protein accession | YP_002274951 |
Protein GI | 209542722 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000951207 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.0890516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGATA CCGCACCGAA AGCCGACCTG ATCGACCTGG AACTGAAGAC GGGCCGTGTG GTCATTCAGT TGCGTCCCGA CCTGGCGCCG CTGGCGGCCG AGCGGATCCG TACGCTGGCG GCCGAGGGCT TCTACGACAA CACGCCCTTC CACCGCGTCA TTCACGGCTT CATGGCCCAG GGCGGCGACC CGACCGGCAC GGGCACCAGC GGCAGCCACC TGCCCGACCT GAAGGCCGAA TTCACCCGCG CCGCGAAGTT CGAGCGCGGC ACCATCGGCA TGGCCCGCAC GATGAACCCG GACAGCGCGA ACAGCCAGTT CTTCATCATG TTCGAGCCCT CGCCCCACCT GGACGGCCAG TACACGATCG TCGGCCAGGT GGTCGAAGGC ATGGAGCATA TCGACCAGAT CAAGCGCGGC GCGGGCCAGA GCGGCACGGT GCAGGACCCG GACCGCATCA TTTCCATGCG TCCCGCCGCA GCCTGA
|
Protein sequence | MSDTAPKADL IDLELKTGRV VIQLRPDLAP LAAERIRTLA AEGFYDNTPF HRVIHGFMAQ GGDPTGTGTS GSHLPDLKAE FTRAAKFERG TIGMARTMNP DSANSQFFIM FEPSPHLDGQ YTIVGQVVEG MEHIDQIKRG AGQSGTVQDP DRIISMRPAA A
|
| |