| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0427 |
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| Symbol | |
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| ID | 6973821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 466452 |
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| End bp | 468092 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643389959 |
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| Product | CRISPR-associated protein, Cse1 family |
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| Protein accession | YP_002274838 |
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| Protein GI | 209542609 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00538764 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.144998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTC TGACCGCTTC ATGGCTGCCC ATTCGCCGGA AATCCGGCGC GGCGGAGACC
ATTCGTCCGG CGCAGATCGT GGACCGCGTG GCCGACGATC CGATCATGGC GCTCGATTGG
CCACGGGCGG ATTTCCGCAT CGCGTCCCTT GAATTCCTGA TCGGATTGCT GGCAACGGCG
TTTCCGCCCA AAAACGAGGA TATCTGGTGC GAAACCTGGG AAGACCCACC TTCCGTGGAG
GCGCTGGACG AAGCCTTCGC CCCTGTGGCC GAAGCCTTCT GGCTCGATGG GCCGGGGCCA
CGCTTCCTGC AGGACCTGGA AAATCTCCAG AGCGGCCAGG AGCCTGTGGA ACGTCTGCTG
ATCGATGCGC CTGGCGATAG CACCGTAAAG AAGAACACGG ATCTGTTCGT GCATCGGCAG
CGGATCATGG CGCTGGGGCG TCCGGCCGCC TGCATGGCCC TGTTTACCCT CCAGTCCTGG
GCGCCGAGCG GCGGTGCGGG AAACATGACC GGCCTGCGGG GCGGCGGCCC CCTGGTCACG
CTGGTCCTGC CCCGGGAGGG AGCGAGCCTG TGGGAGATGG TATGGGCGAA TACGCCCTTC
GGGGTGCCTC CGTCCGAAGC AGACCTGCCC CGTGTGTTCC CGTGGCTCGC GCCGACAATC
GGGTCAGGCA AGGATGGAAC CAGTGTACGC CCAGGCCATA ACGCCCATCC GCTGCAATGC
TGGTGGGGAA TGCCGCGGCG TATTCGCCTC GATTTCGAAG CGGCGGAGGA CGGCATATGC
GACCTGACGG GGCAGCCGGA TGCCGTTCTG GTACCGGGCT GGCGACAGCG TCCTTATGGC
GCAAGCTACG CCGACTGGAC AGGGATGCCC TATGGCGCGG GCGCATCCAT CCACCCGTTG
ACGCCCCGTT ATCGCCAGAA GAAAGACGCC GAATGGCTGA GCGTCCACCC GCAGCCGGGT
GGAATCGGAT ACCGCCATTG GGCCGGGATT GTCGTGAACA GCAGCGATAC GCACCGGCTT
CCGGCAAGCA CGGTGCTGTC ATGGCGTAAC GACCGGGCCC GGAACGTTGC CGCCTCGCTC
ACGCCTCGGC TTCTGGCGGC CGGTTATGAC ATGGACAATA TGAAGGCCCG CAGCTTCGTC
GAGAGCGAGA TGCCGCTGCC CGGCGTGGTC GATCCGGTGC GTCAGGAGGC GCTTGACGCA
CTGGCCCGAG CGTATGTCGA GGCCGCCGAC CAAGTGGCGG GTATCCTCCG ACAGTGTGTC
CGGGAGGCCC TGTTTGGCAA GGGGACCATC TCGCCAGATG CAACGCTGTT CTCCGGCCTG
CGCGAACGGT TCTGGGCGCA GACGGAGGGA ACGTTCTTCG ATCTTCTCCA TCAGGCGGTG
CTGCTGGGTG ACGGAGATGA CATCGATCTG CGGCGCATCT GGCTGCGCGC CCTTCGGCGG
GTGGCCCTGG ACCTGTTCGA CTCCGCCGTC ATGCTGACTC CGGACACGGG AACGACCGAG
GCGCAACGAT CCGCGCTGGC GCGCCGGCGG CTCGGGGCGG CTGTCGCGGG CGGTGGAAAG
GAAGGGCAGG CGCTCATGAT GGTTCTGAAA ATTCCCGTGC CCGTTACACG GAAAGCGACG
TCCAGGATGA AGCAGCCATG A
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| Protein sequence | MNLLTASWLP IRRKSGAAET IRPAQIVDRV ADDPIMALDW PRADFRIASL EFLIGLLATA
FPPKNEDIWC ETWEDPPSVE ALDEAFAPVA EAFWLDGPGP RFLQDLENLQ SGQEPVERLL
IDAPGDSTVK KNTDLFVHRQ RIMALGRPAA CMALFTLQSW APSGGAGNMT GLRGGGPLVT
LVLPREGASL WEMVWANTPF GVPPSEADLP RVFPWLAPTI GSGKDGTSVR PGHNAHPLQC
WWGMPRRIRL DFEAAEDGIC DLTGQPDAVL VPGWRQRPYG ASYADWTGMP YGAGASIHPL
TPRYRQKKDA EWLSVHPQPG GIGYRHWAGI VVNSSDTHRL PASTVLSWRN DRARNVAASL
TPRLLAAGYD MDNMKARSFV ESEMPLPGVV DPVRQEALDA LARAYVEAAD QVAGILRQCV
REALFGKGTI SPDATLFSGL RERFWAQTEG TFFDLLHQAV LLGDGDDIDL RRIWLRALRR
VALDLFDSAV MLTPDTGTTE AQRSALARRR LGAAVAGGGK EGQALMMVLK IPVPVTRKAT
SRMKQP
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