| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0422 |
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| Symbol | |
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| ID | 6973816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 462365 |
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| End bp | 463324 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643389954 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_002274833 |
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| Protein GI | 209542604 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0368078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0376622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGTC CCATGCCGGG CCTGCCGCCA CCGCGACCGA TTCCGCTGAA GGAACGTTCT
TCTCTCCTCT TTGTCGAAAA AGGGCAGATC GACGTTCTCG ACGGTGCCTT CGTGCTGGTC
GGCCATAACG GCATTCGCAC GCATATCCCG ATCGGCGGCC TCGCCTGCCT TATGCTGGAA
CCGGGTACCC GCGTCAGCCA TGCCGCGGCG GCGCTCGCGG CCCGTGCCGG CACGCTGCTG
ATCTGGGTGG GGGAAGCGGG GGTCAGGCTT TACGCCTCGG GCCAGCCAGG GGGGGCGCGG
GCGGACAGGC TTTTGCTTCA GGCCCGACTG GCCCTGGATG ATGCCGCCCG CCTGAAGGTC
GTTCGCAAGA TGTACGCGCT TCGTTTCGGC GAGGATGCGC CGGAACGGCG TTCGGTGGAC
CAGTTGCGGG GTATCGAGGG ATCGCGGGTG CGCGAGACCT ATCGCCTGCT GGCCCGCACG
CACGGGGCGG AGTGGGACGG GCGGCGATAC GATCCGCACG AATGGGATAC CGCCAATCTG
GTCAATCGCT GTCTATCAGC AGCCACAGCC GCGTTGTACG GGATTACCGA AGCGGCGATT
CTGGCTGCGG GTTACGCGCC GGCCATAGGG TTCCTGCATA CGGGAAAGCC GCAGAGCTTT
GTGTACGACA TCGCCGATAT CGTGAAGTTC GAGACTGTCG TGCCCGAGGC TTTCCGGGTG
GCAGCGGCCG TCCAGCATGA AAGACCTTTG GATGGACAGC GGATTTCGGA CCCTGTGGCA
GCCGTTCGCC ACCGATGCCG CGACCAGTTC CGACGTACGA ACATTCTGGG ACGGCTTATC
CCGCTGATCG AAGAGATCCT TTCGGCAGGC GGTGCCGAGA TGCCTCCGGC GCAGGATGAG
GCCATGCCCG TGGCGTTCAA GGACGCGAAA GGGCTGGGCG ATGCTGGTCA TCGTGGTTGA
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| Protein sequence | MSRPMPGLPP PRPIPLKERS SLLFVEKGQI DVLDGAFVLV GHNGIRTHIP IGGLACLMLE
PGTRVSHAAA ALAARAGTLL IWVGEAGVRL YASGQPGGAR ADRLLLQARL ALDDAARLKV
VRKMYALRFG EDAPERRSVD QLRGIEGSRV RETYRLLART HGAEWDGRRY DPHEWDTANL
VNRCLSAATA ALYGITEAAI LAAGYAPAIG FLHTGKPQSF VYDIADIVKF ETVVPEAFRV
AAAVQHERPL DGQRISDPVA AVRHRCRDQF RRTNILGRLI PLIEEILSAG GAEMPPAQDE
AMPVAFKDAK GLGDAGHRG
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