Gene Gdia_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0401 
Symbol 
ID6973795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp438934 
End bp439848 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content74% 
IMG OID643389933 
Productintegrase family protein 
Protein accessionYP_002274812 
Protein GI209542583 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.966282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC AGGCCGAGGC GTTCCTCGAA ATGCTGGCGG CCGAACGGGG TGCCGCCGCG 
AACACGCTGA AGGCCTATGG CCGGGACCTG GACGATTTCG CCGCCCACGC CCGGCAGGCG
GGCCGGTCGC TCCATGACGC CGATTCCGCC CTGCTGCGCG ATTACATGGG CAGCCTGGCT
CGTGCCGGAC TGTCGCCGCG GACCCAGGCG CGGCGCCTGT CCTGCCTGAA GCAGTTTCAC
CTGTTCCTGG CGCGCGAGGG CGTGCGGCAG GACAATCCGG CCGAACTGCT GGACACGCCG
CGCCTGCCCG CGACGCTGCC CCGCTTCCTG ACCGAGGACG AGGTCGATGC CCTGCTGGCC
GCCTGCGTTC CCCCGCCCGA TGGCGGCGCG GCGCGGCGGT GGCTGGTGGC CCGCGCCGCG
CTGGAAATGC TGTATGCGTC CGGCCTGCGG ATATCCGAAC TGCTGGCGCT GCCCCGGCGC
GGCCTGGGCC GTGACGCGCA GATGCTGATG GTACGCGGCA AGGGCGGGCG CGAGCGACTC
GTGCCCCTGT CGGCGGCGGC CCGGGCGGCG GCCGAGGCGC TGATCGCCCA TGACGGGCCC
CGCCGCAGCC CATACCTGTT TCCCGGCCGC GCGCCGGACC GGCCGCTGAC GCGGCAGGGG
TTCGACCGCA TCCTGCACGA CGTCGCGCTA CGCGCCGGGC TGGACCCGGC CCGGCTGTCC
CCGCACGTAC TGCGTCATTC CTTCGCCACG CACATGCTGG CCCGGGGGGC CGACCTGCGG
GCGCTGCAGG TCCTGCTGGG CCATGCCGAC ATCGCCACGA CCCAGATCTA TACCCACGTC
CTGGCCGAAC GGCTGCGCCA GGCGGTCGAG GCCTATCACC CGCTGGCGCG TGGCGGGGAC
GGAGAAACCC GCTGA
 
Protein sequence
MSAQAEAFLE MLAAERGAAA NTLKAYGRDL DDFAAHARQA GRSLHDADSA LLRDYMGSLA 
RAGLSPRTQA RRLSCLKQFH LFLAREGVRQ DNPAELLDTP RLPATLPRFL TEDEVDALLA
ACVPPPDGGA ARRWLVARAA LEMLYASGLR ISELLALPRR GLGRDAQMLM VRGKGGRERL
VPLSAAARAA AEALIAHDGP RRSPYLFPGR APDRPLTRQG FDRILHDVAL RAGLDPARLS
PHVLRHSFAT HMLARGADLR ALQVLLGHAD IATTQIYTHV LAERLRQAVE AYHPLARGGD
GETR