| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0174 |
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| Symbol | |
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| ID | 6973566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 189656 |
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| End bp | 191974 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643389707 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_002274588 |
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| Protein GI | 209542359 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.191382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGGA AAGATCGAAA AGGCGGGCAA CCATTTACCA TGGCTGGAGT TGGCCTCGTC
CTGCTCTCTT CCGTATCGCA GGCTGCTGAA AGTAAATCGA CAACCAAGCC CCGTCCCGTC
CTGTCCGGCC CGCAGCAGCA TGCCTCGGCA CCCAAATCCA AGCCCGCGGC TCCAGCCACA
CCTGTCCCGA CGGCACAACA TATCCTGGTT ACGGGGCGCA CCGTTTCCGG TGCCACAGCC
GATTACAACA AGAAGACGGC CTATCTCGGT CCCCTTGGCA ACAGGAGCAT TTTGGATACG
CCGATGTCGA TCCAGTCCGT GCCGCACGAT GTCATGGTCA ATCAGCAGAC GCGCAACCTG
AACGACCTGA TGGGCTACAT GTCTTCGGTG CAGCTGGAAG TGCGCGGCGA CCCGAACACC
AGTCGCCCGC AATCGCGCGG TTTCGAGGCC GATGTCATCG CCAATACCCG CCTCGACGGG
CTGAATATCG TTTCGACCAC GCCGTACGCC GCCGAAATGT TCGAGGACGT GCAGGTTCTC
AACGGTGTGG CCGGTGCGCT CTACGGGGCG CAGAACCCGG CCGGCACCTT CGCCTTCTCG
ACAAAACGTC CGACCGATAC TCCGATCAAT CGCCTGACCG TCGGCGTCGA TTCAATCGGC
ACGCTGATGG AAAATGCCGA CGTGTCCGGC CGGATCGGCA AGAACAAGTG GTTTGGTTAC
CGGATCAACC TGTTGCATGG CGACGGCACG ACCTATGTGC AGAACAGTTG GATGCGCCGC
AACCTGGTCA GCGCGGATTT CGACATCCAT TTCGATCCGG ACACGGTCCT GGAACTCGAC
GCTTCCCACT ATACCTATGT TCAGCGTGGA ACGACGCCGG GATTCAACCT TGCGTATAAC
GCGACGTCGC TTCCGCCGGC GCCCGATCTC AGCAAGCCCA ACCTGGGGCA GGACTATGCC
GGTTACAATA TGGAAACGAA CCTGTTCATG GCGAAGATAA AACATACCAT CAACAGGGAC
TGGAGCTTCA CCCTCGGGGG CAACTACGAG GATTCGATCC GCCAGGTCTT CAGCAACACC
AATACCCTGA CGACCGGGCC TGTCGGTGAA TATACCCAGA CCATCGCGGC GGCGGTCACC
GCCAACGATT TCCGCTCCGG CGCCAATCTT GCCTACGTCA ACGGGCACTT CCACACCGGT
TTCATCACGC ATGATATCGT GGCCGGCACG AACGGCTACA TGATGGGCAA TTACAATCCC
ACGCAGGGCG AGACGATTGC CCTGGGCAAG TCCAACATGT ATTCGCCATC CGTCCTGTCC
GGGTCGCAGC CCTATTATCA CGGGCGTTAT GAATCGGCCT ATATCCGCAA CCAGGCGATG
ATCCTGGGCG ACACCCTGCA CCTGGACCGC CACTGGTCCA TCGTCGGCAC GCTGACCTGG
AACTGGCTGA GCCAGGATAA TCGCTCAACG AAGTCAAGGA CGGTCAAGGA CGGCAACACC
ACCTATTCGT ACACCACGCC GCTCGGCTGG ACGAGCAAGC ATATCGACGG GGCCTTCAGC
CCGATGGCGA GCCTGGTGTA CAAGCCCGCC GAAAACCAGA CGGCCTATTT CACCTATGGC
CGCGCCATCC AGGCGGGTGT CCAGGCACCG GCGTCCGCCG CGAATGCGAA CCAGATGACC
CAGCCGTTCC GCAGCGAGGA ATATGAGGTC GGCTACAAGA TCAGCTATCA GAAGATGCTG
TTCAGCGTCG CGGGATTCCG CATGAATCGC CCTTACGCCT ATCAGGACGC GAACGGATAT
TTCGGCACCT TCGGCATGCA GACCAACTAT GGCGTCGAGG TCCAGGCGCA GGGACGCATC
ACGCCCGACC TGTCCGTCCT GGCCGGCATG ACCTGGCTTG ACGCCGAACT GGGCGGTACC
GGCAATGCCG CCACCAATAA CAAGGAGGTC GTGGGCGCCC CGCCGGTCCA GGCGAACATC
CTGCTGGATT ACCGGCTGCC CATCCCGCAC GGTGCCTTTG CGTCCGGCCT GGCCGTCAAC
GCGAATGTCC ATTACACCGG TCGTCGTGCC GCCACCATAA CGAATTCGGC CTATGCCGAC
GCATACGCCA CGCTGGACCT GGGCATTCGT TATCCCTTCT TCGCGGCGCA TCACCCCTGG
GCGGCCCGCT TCGGCGTGAC CAATGTCGCG AATACGCAGT ACTGGTCATC CCTCTATCCT
GCGAGCAACA ACGGTTCGCT GAACAACGAC ACCGGGGCCA GCAGTATTTA TGCCGGCCTG
CCGCGCATGT TCCACTTCAC GTTGGAGGCC GATTTCTGA
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| Protein sequence | MSRKDRKGGQ PFTMAGVGLV LLSSVSQAAE SKSTTKPRPV LSGPQQHASA PKSKPAAPAT
PVPTAQHILV TGRTVSGATA DYNKKTAYLG PLGNRSILDT PMSIQSVPHD VMVNQQTRNL
NDLMGYMSSV QLEVRGDPNT SRPQSRGFEA DVIANTRLDG LNIVSTTPYA AEMFEDVQVL
NGVAGALYGA QNPAGTFAFS TKRPTDTPIN RLTVGVDSIG TLMENADVSG RIGKNKWFGY
RINLLHGDGT TYVQNSWMRR NLVSADFDIH FDPDTVLELD ASHYTYVQRG TTPGFNLAYN
ATSLPPAPDL SKPNLGQDYA GYNMETNLFM AKIKHTINRD WSFTLGGNYE DSIRQVFSNT
NTLTTGPVGE YTQTIAAAVT ANDFRSGANL AYVNGHFHTG FITHDIVAGT NGYMMGNYNP
TQGETIALGK SNMYSPSVLS GSQPYYHGRY ESAYIRNQAM ILGDTLHLDR HWSIVGTLTW
NWLSQDNRST KSRTVKDGNT TYSYTTPLGW TSKHIDGAFS PMASLVYKPA ENQTAYFTYG
RAIQAGVQAP ASAANANQMT QPFRSEEYEV GYKISYQKML FSVAGFRMNR PYAYQDANGY
FGTFGMQTNY GVEVQAQGRI TPDLSVLAGM TWLDAELGGT GNAATNNKEV VGAPPVQANI
LLDYRLPIPH GAFASGLAVN ANVHYTGRRA ATITNSAYAD AYATLDLGIR YPFFAAHHPW
AARFGVTNVA NTQYWSSLYP ASNNGSLNND TGASSIYAGL PRMFHFTLEA DF
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