| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0171 |
|---|
| Symbol | |
|---|
| ID | 6973563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 185312 |
|---|
| End bp | 186655 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643389704 |
|---|
| Product | transposase IS1182 family protein |
|---|
| Protein accession | YP_002274585 |
|---|
| Protein GI | 209542356 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3666] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.0154733 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCT TCATTCCGTT TGATCGATCG CAGCCGTATC TTCTGCCGCC GGATCTGAAG
TCATGGCTGC CGTCGGACGA TGTGGCGCAT TTCATCGTGG CGGCGGTAGA GCGGGTGCCG
TTGAGGGCAT TTTCCGTTCC TGTGCGGACT GGCGGCAAGG CGCAGTATCA TCCGCGCCTG
ATGCTGGCGC TGCTGATTTA CGCCTATGCG AACGGCGTGT TCTCATCGCG TCGGATCGAA
CGGGCGACAT ATCGTGATAT CGGTATGCGC TTTGTGGCGG CGAACCTGCA TCCTGACCAT
GACACGATCG CGACGTTCCG GCGCGGCAAC CGCACGGCGA TCGAGGCAGC GTTCATGCAT
GTACTCCTGC TGGCACGCGA GACGGGACTG GTGCGGCTTG GCACGGTGTC GATCGACGGC
ACGAAGATCG ATGCCAATGC CTCGAAATAC CGTTCCATTC GTTATGATCG CGCGAAAGAG
CTGCGCGAGA AACTGGCCAC CGATATCTCC ACCCTGATGG AACGGGCAGA GGCGGCGGAT
ACAACCGATG TGGATCATCA GGCGTTGCCG GAGGAACTGG CCCGGCGGGA GGCTCTGAAG
GCAAAGCTGG ATGAAGCCTG TGCGCGACTG GAGGCGGAAG CCCGCGAGCA GGCCAAGACC
GCCCGACCAG AATATGAGCG CAAGAAGGCA GCTTTTGATG CGAAGCGGGG ACGGCGCGGT
CGGCCGCCGA AAGAACCGGA CGATGAACCG CCACCAGACC GGCAGATCAA CCTGACCGAT
CCGGACAGCA AGCTGATGCG CCGCTCCGAC GCGCATGAAT ACCGGCAAGC CTACAATGCC
CAGGCCGTGG TTTGTGCCGA GGGCAGCCAG TTGATCTTGG AAAATGGCGT CGTTGCGACG
ACGGCGGACG CGCCCAGCTT CGCCGCCACC ATCCTGGGTA TGGAGGAGAG GATCGGCCTG
CCACGAACCG TCCTCGCCGA CACGGGTTTC GCCAGCGGCA AAGCCGTCGA AACGTTGCAG
GCCAGCGGCG TGGACCCGCT GGTCGCCATC GGACGCCCTG TGAATCGGCG CCCTTATGAC
TTCCGGCCAG AACCGCCACC CAGGGAGCCG CGCCGGATCA CCGAGCCCTG GCGCCTGGAA
ATGAAGGCCA GGCTGCAACA GAACCCGGCA AAAGCCCTTT ACGCCTTACG CAAGCAGACC
GTCGAACCGG TCTTCGGTAT CATCAAGAGC GCCATGGGCT TCACCCGTTT CCATCTCCGT
GGCCTCCCCA ACGTCGCAAC AGAATGGACG CTCGTCGCCC TCGCATATAA TTGCCGTAGG
ATCACGCGAC TGACGGCCGC ATAA
|
|---|
| Protein sequence | MSSFIPFDRS QPYLLPPDLK SWLPSDDVAH FIVAAVERVP LRAFSVPVRT GGKAQYHPRL
MLALLIYAYA NGVFSSRRIE RATYRDIGMR FVAANLHPDH DTIATFRRGN RTAIEAAFMH
VLLLARETGL VRLGTVSIDG TKIDANASKY RSIRYDRAKE LREKLATDIS TLMERAEAAD
TTDVDHQALP EELARREALK AKLDEACARL EAEAREQAKT ARPEYERKKA AFDAKRGRRG
RPPKEPDDEP PPDRQINLTD PDSKLMRRSD AHEYRQAYNA QAVVCAEGSQ LILENGVVAT
TADAPSFAAT ILGMEERIGL PRTVLADTGF ASGKAVETLQ ASGVDPLVAI GRPVNRRPYD
FRPEPPPREP RRITEPWRLE MKARLQQNPA KALYALRKQT VEPVFGIIKS AMGFTRFHLR
GLPNVATEWT LVALAYNCRR ITRLTAA
|
|---|
| |