Gene Gdia_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0144 
Symbol 
ID6973536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp158162 
End bp159586 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content71% 
IMG OID643389678 
Productdethiobiotin synthase 
Protein accessionYP_002274559 
Protein GI209542330 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR02072] biotin biosynthesis protein BioC
[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.211479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0379424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGC GCAAGCACCA GATCGCGGCC CGTTTCGGCG GTGCCGACTC CTATGACGCC 
GCCGCCCGCA TCCAGGCGTC GGTGGCAGCG CGCCTGGCCG ATCGGATCAG GGCCGCCTGC
GATGCGGCCG GTGGCCTGGC GCCGGCCCGT ATCCTCGAAC TGGGTTGCGG CACCGGTTTC
CTGAGCGCCC ATCTGCGCCG CCTGTTCCCC GATGCCATCC TGACGGTTAC CGATCTGGCG
CCGGAAATGG TCGAACGCGC GCGCGCGCGC CTGACGCCCC TGGGCGGGGA CGTCCGCTAT
GCGGTCGTGG ACGCGGAAGA TCCCGCATCG GTCGGCACGG GGTTCGACCT GATCTGTTCC
AGCCTGTCGA TGCAATGGTT CACGGACCCC GCCGCAACGC TGGACCGCCT GGCCGCGCGG
CTGGCGCCGG GCGGCATGAT GGCGCTTTCC ACCCTCTGCG CCGGCAGCTT CGCGGAATGG
CGTGCGGTGC ACCGGGCGGC GGGACTGGAC TGCCCGGTGC CGTCCTATCC GGGCCTGGAG
CAACTGCAGG CCGACTGGCC CGGTGCCGGG GTGGGGTCAT GGCGGCACGA AACGCTGATC
GACCATCCCG CATCCGCGCT GGATTTCGTG CGCGAACTGC GCCAGATCGG CGCATCCCTG
CCGCGCGACG GCGCACGGCC CGCGGGGCCG GGCACGATGC GCCGGCTGTT GCGCGATCTG
GACAACCGGG GCGGCGTTAC CGCGACCTAC GAGATCGGAT ACGGCCTGTT TCGCACGCCG
TCGCGCCGGG GCGTGTTCGT GACCGGTACC GATACCGAGG TCGGCAAGAC ACTGGCGGCG
GCGTGCCTGG TCCAGGCCTG GAATGCGTCC TACTGGAAGC CGCTACAGAC CGGCATTGCC
GAGGACACCG CCGACAGCGT CACCATTGCC GCGCTGTGCG GCGTGGACCC GGCCCGGATC
GCCCGGCCCG CCGTGGTCCT TCCGGCCCCG CTGTCACCCT TCGACGCGGC GGAGCAGGAC
GGGATCACGC TCGATGCCGC GCGGATCGTA CTCCCGCCCG CCCGGGACGC GCGTCCCGTG
GTGGTCGAAG GGGCAGGTGG GGTCATGGTC CCGATTACGC GCGACTGCAT GATGATCGAC
CTGATGGTCC GTTTCGCCCT GCCGGTGGTG GTGGTGGCCC GCAGCCAGCT CGGTACGATC
AACCATACGC TGCTGACCCT GCAGGCCCTG CGGTCACGCG GCCTGGCCGT CGCCGGCGTG
ATCCTGAACG GACAGCCGTC GCGCGAGGCA CGGCGGGCGA TCACCCTGTT CGGCGGGGCC
CGCGTCCTGG CGGAATTTCC GCATCTGGAT CAGGTCGGTC CCGAACAGGT CGCGAACCTG
GCCGGCTTGC TGCCGTCCTA TGACGATCTG TGGTGCTATC CCTGA
 
Protein sequence
MNPRKHQIAA RFGGADSYDA AARIQASVAA RLADRIRAAC DAAGGLAPAR ILELGCGTGF 
LSAHLRRLFP DAILTVTDLA PEMVERARAR LTPLGGDVRY AVVDAEDPAS VGTGFDLICS
SLSMQWFTDP AATLDRLAAR LAPGGMMALS TLCAGSFAEW RAVHRAAGLD CPVPSYPGLE
QLQADWPGAG VGSWRHETLI DHPASALDFV RELRQIGASL PRDGARPAGP GTMRRLLRDL
DNRGGVTATY EIGYGLFRTP SRRGVFVTGT DTEVGKTLAA ACLVQAWNAS YWKPLQTGIA
EDTADSVTIA ALCGVDPARI ARPAVVLPAP LSPFDAAEQD GITLDAARIV LPPARDARPV
VVEGAGGVMV PITRDCMMID LMVRFALPVV VVARSQLGTI NHTLLTLQAL RSRGLAVAGV
ILNGQPSREA RRAITLFGGA RVLAEFPHLD QVGPEQVANL AGLLPSYDDL WCYP