Gene Gdia_0104 details

Gene Information

• Locus tag: Gdia_0104
• Symbol: smpB
• ID: 6973495
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gluconacetobacter diazotrophicus PAl 5
• Kingdom: Bacteria
• Replicon accession: NC_011365
• Strand: +
• Start bp: 116562
• End bp: 117050
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643389637
• Product: SsrA-binding protein
• Protein accession: YP_002274519
• Protein GI: 209542290
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.283448
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 41
• Fosmid unclonability p-value: 0.241767
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGGAAA AGAAAAAGAG CGGCATGATT TCGACCGGGA TCGCGGCGCA GAACCGCAAG 
GGCCGCTTCA ACTACACGAT CCTGGAAACG CTGGAAGCCG GGATGGTGCT GAAGGGCCCC 
GAGGTCAAGA GCCTGCGCCT GGGCCGCGCC ACGATCAACG AGGCCTATGC CGGCGACCGG 
GACGGCGAGA TCTGGCTGTT CAACAGCTAT ATCCCCGAGT ACCAGGGCGG TGTGCTGTCG 
CGGTTCGAAA CCCGCGCGCC CCGCAAATTG CTGCTGCACC GCAAGCAGGT GGACAAGCTG 
CTGGGCGCCG TCGCGCGCGA TGGCGTGACC CTGGTGCCGC TGGATATCCA TTTCAACGCC 
CGTGGGGTTG CCAAGGTGAC GCTGGGTATC GGCGAGGGGC GCAAGAAGGC GGACAAGCGC 
CAGGCCATTG CCGACCGCGA CTGGCAGCGG GACAAGGCGC GGCTGCTGCG CAACAAGGGC 
AGGGAATAG 

 

Protein sequence

MAEKKKSGMI STGIAAQNRK GRFNYTILET LEAGMVLKGP EVKSLRLGRA TINEAYAGDR 
DGEIWLFNSY IPEYQGGVLS RFETRAPRKL LLHRKQVDKL LGAVARDGVT LVPLDIHFNA 
RGVAKVTLGI GEGRKKADKR QAIADRDWQR DKARLLRNKG RE