Gene Gdia_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0086 
Symbol 
ID6973475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp98996 
End bp99736 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content71% 
IMG OID643389617 
Producthemolysin A 
Protein accessionYP_002274501 
Protein GI209542272 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.162277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.205136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAAGC AACGCGCGGA CCAGATGCTG GTCGACCGGG GACTGGTGGA AAGCCGTACC 
CGCGCCCAGG CGCTGATCCT GGCCGGCCTG GTCTTTTCGG GCGACCGGCG CGTGGCCAAG
GCCGGCGACC AGTTGCCCGA GGACGCGCCG CTGCGGCTGA AGGGACAGGA TCATCCCTGG
GTGTCGCGCG GCGGCATCAA ACTGGCGCAT GCGCTGGCGC ATTTCGGCCT GTCGCCCGAA
GGCGGCATCT GCCTGGATGT CGGCGCGTCG ACCGGCGGCT TCACCGACGT CCTGCTGACG
CACGGCGCGG CAAAAATCTA TGCCGTCGAT GTCGGGCATG GCCAACTGGC CTGGAAGCTG
CGCAGCGACC CGCGCGTGAC GGTGCTGGAA AAATGCAACG CCCGCGCGCT GGATGCGACG
ACGATCCCCG ACCCGATCGA CGTGCTGGTC TGCGATGCCA GCTTCATCGG CCTGCGCACG
GTCCTGCCCG CCGGGCTGGC GTTGTGCCGT CCGGGCGCCG GGGCCGTGGC CCTGATCAAG
CCGCAATTCG AGGCCGGGCG CGACGCGGTG GGGCCAAAGG GCGTGGTGCG CGACCCCGCG
ATCCATGACG CGGTCTGCGC CACCATCCGC GACTGGTGGT CCGCCATGCC CGGCTGGACG
GTGCTGGGGA TCGAACCCAG CCCGATCACG GGCCCGGAAG GCAACCGCGA ATTCCTGATC
GCCGCGCGGC GGGACGGATA G
 
Protein sequence
MAKQRADQML VDRGLVESRT RAQALILAGL VFSGDRRVAK AGDQLPEDAP LRLKGQDHPW 
VSRGGIKLAH ALAHFGLSPE GGICLDVGAS TGGFTDVLLT HGAAKIYAVD VGHGQLAWKL
RSDPRVTVLE KCNARALDAT TIPDPIDVLV CDASFIGLRT VLPAGLALCR PGAGAVALIK
PQFEAGRDAV GPKGVVRDPA IHDAVCATIR DWWSAMPGWT VLGIEPSPIT GPEGNREFLI
AARRDG