| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0078 |
|---|
| Symbol | |
|---|
| ID | 6973467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 91209 |
|---|
| End bp | 92084 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643389609 |
|---|
| Product | protein of unknown function UPF0187 |
|---|
| Protein accession | YP_002274493 |
|---|
| Protein GI | 209542264 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3781] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.323458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.00334919 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTGTCG ACCGGCGGAT CGGATTGTTC ATTCTGATGC GCGAAAGCCT GCTGGCGCTG
GCCATCCTGG GCGCGTGGGA CGTCTTCGTC GTCATCATGT TCCAGGTCTA TCACCAGGAC
TGGATGGAAC AGCCCACGCT GCCGGTCTCG CTGATCGGTT CGGCGGTCGT GCTGTTCCTG
AGCGTGCGGA ACACCGCCGC CTATAATCGC TGGTGGGAGG CACGGACCCT GTGGGGCGCC
ATCACCAACA ATTGCCGGTC CTTCGGGCGG CAGGCGGGCT CGCTGCTGGG CGGGCGGCCC
GACCTGGCGC GGGCCATGGC GGCCTATCCC TATGCCCTGC GCGGCGCGCT GGGCCGCCTG
GACTGCGCCG AGGACGTGGA GCGCCTGCTG CCGCCCCCGA TGCAGCAGGC CATCGCCGGC
TGGACGAACC AGCCGAATGC GATCCTCTAC CAGATCGGCC TAGCCGTGAA CCAGGAGGTC
GCACGGCAGG GAATCGACGG GGCCGTCCAC GGCCAGATCG ACCGCATCCT GTCCGACCTG
GCCAATGCCC AGGGGGGGCT GGAGCGCATT CGCAACACGC CGCTGGCGAT CCAGTTTTCC
CTGATTCCCC GGCTGGTGGC GAATGTGTTC TGCGTCGTGC TGCCGCTGTC GATGGTGCAG
ACGCTGGGCT GGATCACGCC CCTGGGGTCG TCCCTGGTCG GCCTGCTGTT CGTGGCGCTG
GACAAGATCG GCAGCGACCT GCAGGAACCG TTCGTCCGCT CGCCGCACGC CATGCCGATG
CTGACCATGG CCAGGACGAT CGAAATCGAC CTGCTGCAGC CGGCGGGCCA GCCGGTCGGC
GGCCCCATTG CGCCGGTGCG CGGCGTGCAA TCCTGA
|
|---|
| Protein sequence | MIVDRRIGLF ILMRESLLAL AILGAWDVFV VIMFQVYHQD WMEQPTLPVS LIGSAVVLFL
SVRNTAAYNR WWEARTLWGA ITNNCRSFGR QAGSLLGGRP DLARAMAAYP YALRGALGRL
DCAEDVERLL PPPMQQAIAG WTNQPNAILY QIGLAVNQEV ARQGIDGAVH GQIDRILSDL
ANAQGGLERI RNTPLAIQFS LIPRLVANVF CVVLPLSMVQ TLGWITPLGS SLVGLLFVAL
DKIGSDLQEP FVRSPHAMPM LTMARTIEID LLQPAGQPVG GPIAPVRGVQ S
|
|---|
| |