Gene Gdia_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0030 
Symbol 
ID6973419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp34657 
End bp35448 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID643389563 
Producthydrolase, TatD family 
Protein accessionYP_002274447 
Protein GI209542218 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.572785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0962999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGAC TGATCGATTC GCACTGCCAT CTGGACCATT TCACGGATGA CGAGATCCCG 
GACCTGCTGG ACAGGGCGCG CCAGGCCGGG GTCGAAGGGA TGGTGACGAT CGGCACCCGC
CTGTCGCGCG CGGCGCAGCA GAAGGACCTG ACCCGCTTCA GCCGCCCGGA CCTGCGGGTG
TGGTGCACGG TGGGCACGCA CCCGGACCAT GTGGACGAAT GCACGGTCGC GGACGCGGCC
GGTATCGTGG CCCTGGCCGA CGATCCGCGC GTGGTGGGAA TCGGTGAGAC GGGCCTGGAT
TACTTTCACG GGGCCGAATC CGTGCGGCCG TTGCAGCAGG CGCGCTTTCG CGCCCATATC
GCGGCCGCGC GGCAGATGGA CCTGCCGCTG GTCATCCATG CCCGCGATGC CGATGAGGAT
GTCGCCGAGA TCCTGCGGGA CGAAGTGGAG TCCCACGGCC CGTTCCGCTT CCTGCTGCAC
TGCTTCGCCT CGGGTCCCGA CCTGGCGCGG GTGGGGCTGG AACTGGGGGG GTATGTCAGC
TTCTCCGGTA TCCTGACCTT TCCGAAATCG GATGCGCTGC GTGCCGTGGC ACGGGACATT
CCCCAGGACA GGCTGCTGGT GGAAACCGAT TCGCCCTATC TGGCCCCGGT GCCGCAGCGG
GGGCGCAAGA ACGAGCCGGG TTTCGTCGCC CACACGGCGC GCCGGCTGGC GGAAGTACGG
GACATGACGC CCGAAAGCCT GGCCGAGGTC ACGACCGCGA ACTTCCACCG GCTGTTCAGC
CGGGCGGCCT GA
 
Protein sequence
MTGLIDSHCH LDHFTDDEIP DLLDRARQAG VEGMVTIGTR LSRAAQQKDL TRFSRPDLRV 
WCTVGTHPDH VDECTVADAA GIVALADDPR VVGIGETGLD YFHGAESVRP LQQARFRAHI
AAARQMDLPL VIHARDADED VAEILRDEVE SHGPFRFLLH CFASGPDLAR VGLELGGYVS
FSGILTFPKS DALRAVARDI PQDRLLVETD SPYLAPVPQR GRKNEPGFVA HTARRLAEVR
DMTPESLAEV TTANFHRLFS RAA