Gene Gdia_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0025 
Symbol 
ID6973414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp29410 
End bp30249 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content71% 
IMG OID643389558 
ProductRare lipoprotein A 
Protein accessionYP_002274442 
Protein GI209542213 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.674451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0342057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGC TGGGACTGCT GGGCTGCCAT CGGGCGGAGC CCGGGCTGCC CCCTGCGGCG 
CCGCATTACG TCGTCGGCGC GCCGTACCAG ATGGACGGCG TGTGGTACTA CCCGCACGAG
GATTTCTCCT ATCAGGCGAC CGGCCTGGCC GTCGCCGACC CGGACCGCAC GCCCTACGTC
ACGGCGGATG GCGAGCATTA CAGCCCCGAT GCCCTGACCG GCCGCCATGC GACGCTGCAG
CTTCCGGCCA TCGTCACGGT GCGCAACCTG GAAAACGGGC GTGAAATCAC CATCCGGGTG
AATGACCGGG GACCGGATTC GCCGGGCCGG CTGATCGGCC TGTCGCCCAG GGCCGCCGCC
CTGCTGGGGA TCGGCAGCAA TCCGGTGCGG GTCGCGGTCA CGGGACTGGA AGCGCAGAAC
GAGCAACTGG CCGAGGGTCT GCCGGGCACC CAGCACCTGG ATATCGCGGC GGCGCCGGCC
GGCCAGGTCC GTGCCGAATC GCTGGACCAT CCGGGCAGCG GGGCCACGAT CGTCGGCGCC
CCCGGCGGGA CGGTGGGGGC GGCGGATATC TCGGCCCTGA TGGGCGACCT GCCTCCCAGC
GTGCGCCAGG GCTATGTGGT GGGCGGGCTG CTGTGGGTCG ATGCCGGCAC GTTTTCGACC
CTGCGCTATG CCGAACTGTC GGCCGCGCGG ACCGGCGGCC GCGTCGTGCC GGTCCAGGAA
CACGGACGGG CGCTGTGGCG GGTCCATGTC GGGCCGTTCA TGAACGCGAC CGACGCCGAC
CGCGCACTGG ACCAGCTTAT GGGCGCCGGA GTAACCGGTG CCCGGATCGT CGTCGAATAG
 
Protein sequence
MAALGLLGCH RAEPGLPPAA PHYVVGAPYQ MDGVWYYPHE DFSYQATGLA VADPDRTPYV 
TADGEHYSPD ALTGRHATLQ LPAIVTVRNL ENGREITIRV NDRGPDSPGR LIGLSPRAAA
LLGIGSNPVR VAVTGLEAQN EQLAEGLPGT QHLDIAAAPA GQVRAESLDH PGSGATIVGA
PGGTVGAADI SALMGDLPPS VRQGYVVGGL LWVDAGTFST LRYAELSAAR TGGRVVPVQE
HGRALWRVHV GPFMNATDAD RALDQLMGAG VTGARIVVE