Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0025 |
Symbol | |
ID | 6973414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 29410 |
End bp | 30249 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643389558 |
Product | Rare lipoprotein A |
Protein accession | YP_002274442 |
Protein GI | 209542213 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.674451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0342057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCGC TGGGACTGCT GGGCTGCCAT CGGGCGGAGC CCGGGCTGCC CCCTGCGGCG CCGCATTACG TCGTCGGCGC GCCGTACCAG ATGGACGGCG TGTGGTACTA CCCGCACGAG GATTTCTCCT ATCAGGCGAC CGGCCTGGCC GTCGCCGACC CGGACCGCAC GCCCTACGTC ACGGCGGATG GCGAGCATTA CAGCCCCGAT GCCCTGACCG GCCGCCATGC GACGCTGCAG CTTCCGGCCA TCGTCACGGT GCGCAACCTG GAAAACGGGC GTGAAATCAC CATCCGGGTG AATGACCGGG GACCGGATTC GCCGGGCCGG CTGATCGGCC TGTCGCCCAG GGCCGCCGCC CTGCTGGGGA TCGGCAGCAA TCCGGTGCGG GTCGCGGTCA CGGGACTGGA AGCGCAGAAC GAGCAACTGG CCGAGGGTCT GCCGGGCACC CAGCACCTGG ATATCGCGGC GGCGCCGGCC GGCCAGGTCC GTGCCGAATC GCTGGACCAT CCGGGCAGCG GGGCCACGAT CGTCGGCGCC CCCGGCGGGA CGGTGGGGGC GGCGGATATC TCGGCCCTGA TGGGCGACCT GCCTCCCAGC GTGCGCCAGG GCTATGTGGT GGGCGGGCTG CTGTGGGTCG ATGCCGGCAC GTTTTCGACC CTGCGCTATG CCGAACTGTC GGCCGCGCGG ACCGGCGGCC GCGTCGTGCC GGTCCAGGAA CACGGACGGG CGCTGTGGCG GGTCCATGTC GGGCCGTTCA TGAACGCGAC CGACGCCGAC CGCGCACTGG ACCAGCTTAT GGGCGCCGGA GTAACCGGTG CCCGGATCGT CGTCGAATAG
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Protein sequence | MAALGLLGCH RAEPGLPPAA PHYVVGAPYQ MDGVWYYPHE DFSYQATGLA VADPDRTPYV TADGEHYSPD ALTGRHATLQ LPAIVTVRNL ENGREITIRV NDRGPDSPGR LIGLSPRAAA LLGIGSNPVR VAVTGLEAQN EQLAEGLPGT QHLDIAAAPA GQVRAESLDH PGSGATIVGA PGGTVGAADI SALMGDLPPS VRQGYVVGGL LWVDAGTFST LRYAELSAAR TGGRVVPVQE HGRALWRVHV GPFMNATDAD RALDQLMGAG VTGARIVVE
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