Gene Gdia_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0020 
Symbol 
ID6973409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp24982 
End bp25824 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content67% 
IMG OID643389553 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_002274437 
Protein GI209542208 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.434672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.115672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCA TCCAAGCCAT CGTGATCGCG ATCCTCCAGG GGGCGACGGA GCTGTTCCCG 
GTCAGCAGCC TGGGGCATGC CGTCATCGTC CCCGCCCTGC TGGGCTGGGC GTTCGACCCG
CACGGCGAAA TCTTCCTGCC GTTCCTGGTC ATGCTGCACC TGGGCACCGC GATCGCCCTG
CTGGTCTATT TCCGCAATGA CTGGGCGGCC ATCTTCCAGG GGCTGAGGGG CCGCGACGGC
AGCCAGCGCC AGGCCGAAAG CATCCATATC CTGGCCCTGC TGGTGGTGGC GACCATTCCG
GCGGTCATTA TCGGCGGCCT GCTGGAACAT TGGCTGCGGG CGCTGTTCGG CACCGCGCGC
TATGCCGCGA TCTTCCTGTT CCTGAACGGC CTGCTGCTGC TGCTGACCGA ACGGATGAAG
AGCCGCCAGC CCGTCCAGGG CGGCTATGCC ATCGCATCGC TGACCTATGC CGACGCCGCG
ATCATCGGCC TGTGGCAGTG CCTGGCCTTC CTGCCCGGCA TCTCGCGGTC GGGGGCCACG
ATCATCGGCG CGCTGTTTCG CGGCCTGAAC CATGAAGGGG CCGCGCGGTT TTCGTTCCTG
ATGGCCCAGC CGGTCATCAT TGCCGCCACG GTGCGCGAGG CCCTGCACAT GCGCCATGTC
GCCATCCCGC CGGGTCAGAT GCAGGTCGCG ACCATCGGCG CCATGGTGGC GGCCGTGACC
GCACTGGCCA GCACCGCGTT CCTGATGCGA TACTTCCACA ATCACGAGCG ATGGGCGCTG
AGCCCGTTCG GCTATTACTG CGTGCTGGCC GGCGCGGTTT CCTTCTTCAT CCTCGGCCAC
TGA
 
Protein sequence
MTLIQAIVIA ILQGATELFP VSSLGHAVIV PALLGWAFDP HGEIFLPFLV MLHLGTAIAL 
LVYFRNDWAA IFQGLRGRDG SQRQAESIHI LALLVVATIP AVIIGGLLEH WLRALFGTAR
YAAIFLFLNG LLLLLTERMK SRQPVQGGYA IASLTYADAA IIGLWQCLAF LPGISRSGAT
IIGALFRGLN HEGAARFSFL MAQPVIIAAT VREALHMRHV AIPPGQMQVA TIGAMVAAVT
ALASTAFLMR YFHNHERWAL SPFGYYCVLA GAVSFFILGH