| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0017 |
|---|
| Symbol | |
|---|
| ID | 6973406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 21308 |
|---|
| End bp | 22486 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643389550 |
|---|
| Product | MscS Mechanosensitive ion channel |
|---|
| Protein accession | YP_002274434 |
|---|
| Protein GI | 209542205 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.305748 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGACG CGTTTATCGA CCTGCTGACC GACATTCGGA AATCGTTCGG ATGGCTTCCC
GGCTCCGTGG CCTCGGTCCT GGTGCTGTGT GCCGCCGCCG TGATGGCCGA ACTCTGCAGC
CGGGTCGTGA CCAAGCTGAT CCTGCGCATA CCGGGGCAGA AGCGCGGGGC CTTCGTCCGC
ACCTTCACCC TGGCCATGCA GCGGCCGGCG CGGGTCATGC TGGCGATCAT CTTCGTCGGC
ACCGCGTTGC CGGCGTCCGG CCTGTCGTAC GAGACCATGC ATCGGGCCGC GCACGGGTTG
CTGGTGCTGT TCGTGCTGAT GGTGGGCTAC GCCGCCATCG TGGCCATGCG AATCCTGTCC
GACGCCTATC TGCTCCGGAT CAACGGCAAG GAGGACCGCG ACGACATCCT GTCGCGGACC
CACATGACGC AGGTGCGCGT GCTGCGGCGC ATGGCGGATA TCCTGGTCGG GCTGCTGACG
GTGGGCTCGG CGCTGATGAC GTTCGAATCG GTGCGGGAAT ACGGGCTCAG CCTGTTCGCC
TCGGCGGGTG CGGCCTCGGT CGTGGTCGGT CTGGCGGCGC GGCCGCTGCT GACCAACCTG
ATCGCCGGCA TGCAGATCGC CATGACCCAG CCGATCCGCA TGGAAGACCT GATCATCATC
AATGGCGACT GGGCGTGGGT CGAGGAAATC ACCGCGACCT ATGTCGTGCT GCGGGTCTGG
GACTGGCGCC GGCACATCGT GCCGATTTCC TGGTTCCTGG AAAACCCGTT CCAGAACTGG
ACCCACAATT CGGCGGCCCT GATCGGGGTG GTGTTCCTGT ACGTGGATTT CCACGCACCG
ATGGACCGGA TTCGCGGTCG GCTGCGCGAT ATCGTGCAGG CAAGCCCGCT ATGGGACGGC
AAGGTGTTCG ATGTCCAGGT GTCGGACTGC AGCACGCAGG TCATGACCAT CCGCGTCATC
GCCAGTGCGC GCTCGGCCAT GCAGAGCTGG GATCTGCGCT GCGAGATCCG CGAGAAGATC
ATCCTGTTCC TGCGCGACGA ATGTCCCGAG GCGCTGCCGC GCGAGCGGAT GGCCCATGTC
TCGTCCCCGG CCGGCCAGGA CGTGCTGGGC CCGCACGGCA TCCTGTCCCC CCCGATCGAC
CGGCCGCCGC CCGGCGCCTA TACCGGCCCT CCAGGCTGA
|
|---|
| Protein sequence | MKDAFIDLLT DIRKSFGWLP GSVASVLVLC AAAVMAELCS RVVTKLILRI PGQKRGAFVR
TFTLAMQRPA RVMLAIIFVG TALPASGLSY ETMHRAAHGL LVLFVLMVGY AAIVAMRILS
DAYLLRINGK EDRDDILSRT HMTQVRVLRR MADILVGLLT VGSALMTFES VREYGLSLFA
SAGAASVVVG LAARPLLTNL IAGMQIAMTQ PIRMEDLIII NGDWAWVEEI TATYVVLRVW
DWRRHIVPIS WFLENPFQNW THNSAALIGV VFLYVDFHAP MDRIRGRLRD IVQASPLWDG
KVFDVQVSDC STQVMTIRVI ASARSAMQSW DLRCEIREKI ILFLRDECPE ALPRERMAHV
SSPAGQDVLG PHGILSPPID RPPPGAYTGP PG
|
|---|
| |