Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0017 |
Symbol | |
ID | 6973406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 21308 |
End bp | 22486 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643389550 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_002274434 |
Protein GI | 209542205 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.305748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGACG CGTTTATCGA CCTGCTGACC GACATTCGGA AATCGTTCGG ATGGCTTCCC GGCTCCGTGG CCTCGGTCCT GGTGCTGTGT GCCGCCGCCG TGATGGCCGA ACTCTGCAGC CGGGTCGTGA CCAAGCTGAT CCTGCGCATA CCGGGGCAGA AGCGCGGGGC CTTCGTCCGC ACCTTCACCC TGGCCATGCA GCGGCCGGCG CGGGTCATGC TGGCGATCAT CTTCGTCGGC ACCGCGTTGC CGGCGTCCGG CCTGTCGTAC GAGACCATGC ATCGGGCCGC GCACGGGTTG CTGGTGCTGT TCGTGCTGAT GGTGGGCTAC GCCGCCATCG TGGCCATGCG AATCCTGTCC GACGCCTATC TGCTCCGGAT CAACGGCAAG GAGGACCGCG ACGACATCCT GTCGCGGACC CACATGACGC AGGTGCGCGT GCTGCGGCGC ATGGCGGATA TCCTGGTCGG GCTGCTGACG GTGGGCTCGG CGCTGATGAC GTTCGAATCG GTGCGGGAAT ACGGGCTCAG CCTGTTCGCC TCGGCGGGTG CGGCCTCGGT CGTGGTCGGT CTGGCGGCGC GGCCGCTGCT GACCAACCTG ATCGCCGGCA TGCAGATCGC CATGACCCAG CCGATCCGCA TGGAAGACCT GATCATCATC AATGGCGACT GGGCGTGGGT CGAGGAAATC ACCGCGACCT ATGTCGTGCT GCGGGTCTGG GACTGGCGCC GGCACATCGT GCCGATTTCC TGGTTCCTGG AAAACCCGTT CCAGAACTGG ACCCACAATT CGGCGGCCCT GATCGGGGTG GTGTTCCTGT ACGTGGATTT CCACGCACCG ATGGACCGGA TTCGCGGTCG GCTGCGCGAT ATCGTGCAGG CAAGCCCGCT ATGGGACGGC AAGGTGTTCG ATGTCCAGGT GTCGGACTGC AGCACGCAGG TCATGACCAT CCGCGTCATC GCCAGTGCGC GCTCGGCCAT GCAGAGCTGG GATCTGCGCT GCGAGATCCG CGAGAAGATC ATCCTGTTCC TGCGCGACGA ATGTCCCGAG GCGCTGCCGC GCGAGCGGAT GGCCCATGTC TCGTCCCCGG CCGGCCAGGA CGTGCTGGGC CCGCACGGCA TCCTGTCCCC CCCGATCGAC CGGCCGCCGC CCGGCGCCTA TACCGGCCCT CCAGGCTGA
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Protein sequence | MKDAFIDLLT DIRKSFGWLP GSVASVLVLC AAAVMAELCS RVVTKLILRI PGQKRGAFVR TFTLAMQRPA RVMLAIIFVG TALPASGLSY ETMHRAAHGL LVLFVLMVGY AAIVAMRILS DAYLLRINGK EDRDDILSRT HMTQVRVLRR MADILVGLLT VGSALMTFES VREYGLSLFA SAGAASVVVG LAARPLLTNL IAGMQIAMTQ PIRMEDLIII NGDWAWVEEI TATYVVLRVW DWRRHIVPIS WFLENPFQNW THNSAALIGV VFLYVDFHAP MDRIRGRLRD IVQASPLWDG KVFDVQVSDC STQVMTIRVI ASARSAMQSW DLRCEIREKI ILFLRDECPE ALPRERMAHV SSPAGQDVLG PHGILSPPID RPPPGAYTGP PG
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