Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0003 |
Symbol | recF |
ID | 6973391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 2776 |
End bp | 3897 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643389535 |
Product | recombination protein F |
Protein accession | YP_002274420 |
Protein GI | 209542191 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCGTC TCGACCGGCT GGCGCTGACG GATTTCAGGA ACTACCGGCA CCTGGCCTGG CGGCCCGAGG CGCCCGTCAC CGTGGTGACG GGCGAAAACG GCAGCGGCAA GACCAATCTT CTGGAAGCCC TGTCGCTGCT GGTGCCCGGG CGCGGCCTGC GCGGCGCGCG CAGTGCCGAG ATGGCCCGTC ACGGCACCAC GATCTGGGGC GTCGCGGCGC GCTTCACCGG GCCCGACGGC GCCCCCTTCG ACATCGCCAC CGGCAGCGAT CCGGCGCGGC CGGAACGGCG GGTCTTCCGC CGTGACGGCG AAACCCTGCG CAGTCGCGCG GCCCTGGCCG ATCACCTGTC CGCCGTCTGG CTGACCCCGC AGATGGACCG CCTGTTCCAG GACGGCCTGC CGGGCCGGCG GCGCTTCCTG GACCGTCTGG TCCTGGCGCT GGAACCCGGC CACGCGCGCG AACTGGCGGC GCATGACCAG GCCATGGGCC AGCGCAATCG CCTGCTGGCG GCGGGACGCG CCGATCCGGG CTGGCTGTCG GCGCTGGAGG ATTCGATGGC GCGCCATGCC GTCGCGGCCT CGGCCGCGCG GCTGGCGCTG GTGACGCAGT TGAACGGCGA GGCGGCGCAT ACGGTGCCGG ACGGCTTTCC CCCGGCGCGG CTCGATATCC TGTGCCCCAT CGTCCAGCAA TTGCGCGACC GGCCGGCACT GGCGGTGGAG GATTGGCTGC GCGGACGGCT GGCGGCCGGC CGGGCGGCCG ATGGCGCGCG CGGCGGGGCA GGGATGGGGG CCCATCGGGC CGACATGGCG CTGTCGGACC AGGCCAGCGG CCGCCCGGCG GCACAGGCCA GCACCGGCCA GCAGAAGGCC CTGCTGCTGG GGGTGGTGCT GGCCCACGCG GCGCTGATGA CGCGCAGCCG GGGCGAGGCA CCGATGATCC TGCTCGACGA ACCGCTGGTG CATCTGGACG AGGCGCGGCG GGCGGCCCTG TTTCGCAGCG TGGGCGCGTT CGACGCCACG GTCCTGATGA CCGGAACCGA TGCCGATCAG TTCGCCCCGC TGCGCGGCCG GGCGGGATTC GTCTCCCCCC GCAATGGCGC GCTGGACGGG AAGCCTGTAT GA
|
Protein sequence | MARLDRLALT DFRNYRHLAW RPEAPVTVVT GENGSGKTNL LEALSLLVPG RGLRGARSAE MARHGTTIWG VAARFTGPDG APFDIATGSD PARPERRVFR RDGETLRSRA ALADHLSAVW LTPQMDRLFQ DGLPGRRRFL DRLVLALEPG HARELAAHDQ AMGQRNRLLA AGRADPGWLS ALEDSMARHA VAASAARLAL VTQLNGEAAH TVPDGFPPAR LDILCPIVQQ LRDRPALAVE DWLRGRLAAG RAADGARGGA GMGAHRADMA LSDQASGRPA AQASTGQQKA LLLGVVLAHA ALMTRSRGEA PMILLDEPLV HLDEARRAAL FRSVGAFDAT VLMTGTDADQ FAPLRGRAGF VSPRNGALDG KPV
|
| |