Gene ECH74115_5876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5876 
Symbol 
ID6969790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5533606 
End bp5534079 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content52% 
IMG OID643389493 
Producthypothetical protein 
Protein accessionYP_002273885 
Protein GI209396091 
COG category[S] Function unknown 
COG ID[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000857143 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTGA TCGAATTTCT GTTAGCGTTG GCGCAGGATA TGATCCTCGC CGCCATTCCT 
GCGGTCGGCT TTGCGATGGT GTTCAACGTT CCCGTGCGGG CGTTACGCTG GTGTGCGCTG
CTTGGCTCGA TAGGTCATGG TTCCCGAATG ATCTTGATGA CCAGCGGGTT GAATATTGAG
TGGTCAACCT TTATGGCCTC CATGCTGGGC GGCACCATTG GTATTCAATG GTCGCGCTGG
TATCTGGCGC ATCCGAAAGT GTTTACCGTG GCGGCCGTTA TCCCTATGTT CCCGGGCATA
TCGGCTTATA CCGCAATGAT TTCGGCGGTA AAAATCAGCC AGTTAGGTTA CAGCGAACCG
TTGATGATTA CCCTGTTAAC CAACTTTCTT ACAGCTTCAT CGATTGTTGG TGCGTTATCC
ATCGGTCTTT CCATTCCTGG ATTATGGTTG TACCGCAAGC GCCCTCGCGT ATAA
 
Protein sequence
MGVIEFLLAL AQDMILAAIP AVGFAMVFNV PVRALRWCAL LGSIGHGSRM ILMTSGLNIE 
WSTFMASMLG GTIGIQWSRW YLAHPKVFTV AAVIPMFPGI SAYTAMISAV KISQLGYSEP
LMITLLTNFL TASSIVGALS IGLSIPGLWL YRKRPRV