Gene ECH74115_5780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5780 
SymbolholC 
ID6971359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5414381 
End bp5414824 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content54% 
IMG OID643389410 
ProductDNA polymerase III subunit chi 
Protein accessionYP_002273803 
Protein GI209400926 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACG CGACGTTCTA CCTTCTGGAC AATGACACCA CCGTCGATGG CTTAAGCGCC 
GTTGAGCAAC TGGTGTGTGA AATTGCCGCA GAACGTTGGC GCAGCGGTAA GCGCGTGCTC
ATCGCCTGTG AAGATGAAAA GCAGGCTTAC CGGCTGGATG AAGCCCTGTG GGCGCGTCCG
GCAGAAAGCT TTGTTCCGCA TAATTTAGCG GGAGAAGGAC CGCGCGGCGG TGCGCCGGTG
GAGATCGCCT GGCCGCAAAA ACGCAGCAGC AGCCCGCGCG ATATATTGAT TAGTCTGCGA
ACAAGCTTTG CAGATTTTGC CACCGCTTTC ACAGAAGTGG TAGACTTCGT TCCTTATGAA
GATTCTCTGA AACAACTGGC GCGCGAACGC TATAAAGCCT ACCGCGTGGC TGGTTTCAAC
CTGAATACGG CAACCTGGAA ATAA
 
Protein sequence
MKNATFYLLD NDTTVDGLSA VEQLVCEIAA ERWRSGKRVL IACEDEKQAY RLDEALWARP 
AESFVPHNLA GEGPRGGAPV EIAWPQKRSS SPRDILISLR TSFADFATAF TEVVDFVPYE
DSLKQLARER YKAYRVAGFN LNTATWK