Gene ECH74115_5714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5714 
SymbolsgaE 
ID6967180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5352627 
End bp5353313 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content56% 
IMG OID643389347 
ProductL-ribulose-5-phosphate 4-epimerase 
Protein accessionYP_002273740 
Protein GI209396852 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR00760] L-ribulose-5-phosphate 4-epimerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.792036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGC TAAAACAGCA GGTGTTTGAA GCCAACATGG ATCTGCCGCG CTATGGGCTG 
GTGACCTTTA CCTGGGGCAA CGTCAGCGCT ATCGACCGCG AACGCGGGCT GGTGGTGATC
AAGCCCAGCG GCGTCGCCTA CGAAACCATG AAAGCAGACG ATATGGTGGT GGTCGATATG
AGCGGTAAGG TGGTGGAAGG GGAATATCGT CCGTCTTCCG ACACCGCGAC GCATCTCGAA
CTCTACCGTC GTTATCCGTC GCTTGGCGGC ATTGTCCATA CCCACTCCAC TCATGCTACC
GCATGGGCGC AGGCGGGGCT GGCGATCCCG GCGTTAGGCA CCACGCACGC TGACTACTTC
TTTGGTGATA TCCCGTGTAC GCGTGGATTA AGCGAAGAAG AGGTGCAGGG TGAGTATGAA
CTGAACACTG GCAAAGTGAT TATCGAAACG CTGGGCAACG CCGAGCCGCT GCATACGCCG
GGAATTGTGG TGTATCAGCA CGGACCGTTC GCCTGGGGGA AAGATGCCCA CGACGCGGTG
CATAACGCGG TAGTGATGGA AGAAGTGGCG AAAATGGCGT GGATTGCGCG CAGTATTAAT
CCACAACTCA ATCACATCGA CAGCTTCCTG ATGAATAAAC ACTTCATGCG TAAGCACGGC
CCCAACGCTT ATTACGGGCA GAAGTAG
 
Protein sequence
MQKLKQQVFE ANMDLPRYGL VTFTWGNVSA IDRERGLVVI KPSGVAYETM KADDMVVVDM 
SGKVVEGEYR PSSDTATHLE LYRRYPSLGG IVHTHSTHAT AWAQAGLAIP ALGTTHADYF
FGDIPCTRGL SEEEVQGEYE LNTGKVIIET LGNAEPLHTP GIVVYQHGPF AWGKDAHDAV
HNAVVMEEVA KMAWIARSIN PQLNHIDSFL MNKHFMRKHG PNAYYGQK