Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5714 |
Symbol | sgaE |
ID | 6967180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5352627 |
End bp | 5353313 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643389347 |
Product | L-ribulose-5-phosphate 4-epimerase |
Protein accession | YP_002273740 |
Protein GI | 209396852 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.792036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAGC TAAAACAGCA GGTGTTTGAA GCCAACATGG ATCTGCCGCG CTATGGGCTG GTGACCTTTA CCTGGGGCAA CGTCAGCGCT ATCGACCGCG AACGCGGGCT GGTGGTGATC AAGCCCAGCG GCGTCGCCTA CGAAACCATG AAAGCAGACG ATATGGTGGT GGTCGATATG AGCGGTAAGG TGGTGGAAGG GGAATATCGT CCGTCTTCCG ACACCGCGAC GCATCTCGAA CTCTACCGTC GTTATCCGTC GCTTGGCGGC ATTGTCCATA CCCACTCCAC TCATGCTACC GCATGGGCGC AGGCGGGGCT GGCGATCCCG GCGTTAGGCA CCACGCACGC TGACTACTTC TTTGGTGATA TCCCGTGTAC GCGTGGATTA AGCGAAGAAG AGGTGCAGGG TGAGTATGAA CTGAACACTG GCAAAGTGAT TATCGAAACG CTGGGCAACG CCGAGCCGCT GCATACGCCG GGAATTGTGG TGTATCAGCA CGGACCGTTC GCCTGGGGGA AAGATGCCCA CGACGCGGTG CATAACGCGG TAGTGATGGA AGAAGTGGCG AAAATGGCGT GGATTGCGCG CAGTATTAAT CCACAACTCA ATCACATCGA CAGCTTCCTG ATGAATAAAC ACTTCATGCG TAAGCACGGC CCCAACGCTT ATTACGGGCA GAAGTAG
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Protein sequence | MQKLKQQVFE ANMDLPRYGL VTFTWGNVSA IDRERGLVVI KPSGVAYETM KADDMVVVDM SGKVVEGEYR PSSDTATHLE LYRRYPSLGG IVHTHSTHAT AWAQAGLAIP ALGTTHADYF FGDIPCTRGL SEEEVQGEYE LNTGKVIIET LGNAEPLHTP GIVVYQHGPF AWGKDAHDAV HNAVVMEEVA KMAWIARSIN PQLNHIDSFL MNKHFMRKHG PNAYYGQK
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