Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5599 |
Symbol | |
ID | 6968301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 5238089 |
End bp | 5239012 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643389235 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_002273632 |
Protein GI | 209397860 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.49086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCGC TCTGTGCAGG CGCGCTGCTG GCCGCAGCAC CGTTCGCCCA GGCGAAAGAA CTGAAATCAA TAGGCGTAAC GGTGGGCGAT CTGGCGAACC CGTTCTTCGT GCAGATCACC AAAGGCGCGG AGCTGGAAGC ACGCAAACTG GCAGGCGATA ACGTCAAAGT GACGCTGGTT TCCAGCGGCT ACGATCTGGG TCAGCAGGTG TCGCAGATAG ACAACTTTAT CGCCGCTAAC GTCGATATGA TTATCCTCAA CGCTGCCGAT TCAAAAGGGA TCGGCCCGGC GGTGAAACGG GCGAAAGATG CCGGGATCGT GGTCGTCGCG GTTGACGTAG CGGCAGAAGG TGCCGATGCC ACCATCACTT CCGATAACAC CCAGGCAGGC GAAATGGCCT GTAAATACAT CACCGATCGC CTGAAAGGCA AAGGCAACGT GGTGATCATC AACGGCCCGC CGGTATCCGC CGTGCAAAAC CGCGTCGAAG GATGCCAGAC TGAATTTAAA CGCCATCCTG ACATCAAAGT GCTCTCTGAC AACCAGAACG CGAAAGGCAG TCGTGAAGGC GGGCTGGAGG TAATGACGGG ACTGCTGGCG GCAAATCCGA AGATCGACGG CGTATTTGCG ATTAACGATC CCACCGCAAT CGGTGCCGAT CTGGCAGCAA AACAGGCACA ACGTAACGAG TTCTTTATTG TCGGTGTGGA CGGAAGCCCG GACGCCGAAG AGGCGCTCAA GCGTGAGAAC TCGTTGTTTG TCGCTACTCC GGCGCAAGAT CCCCAGGTGA TGGCAGCGAA AGCGGTGGAA ATTGGCTACG ACATTTTGCA GGGCAAACCT GCGCCGAAAG AGCCGGTGCT GATCCCGGTG ACGATGATCG ATAAAAACAA CGTCGGCAAT TACAAAGGCT GGACGGTGAA ATAA
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Protein sequence | MTALCAGALL AAAPFAQAKE LKSIGVTVGD LANPFFVQIT KGAELEARKL AGDNVKVTLV SSGYDLGQQV SQIDNFIAAN VDMIILNAAD SKGIGPAVKR AKDAGIVVVA VDVAAEGADA TITSDNTQAG EMACKYITDR LKGKGNVVII NGPPVSAVQN RVEGCQTEFK RHPDIKVLSD NQNAKGSREG GLEVMTGLLA ANPKIDGVFA INDPTAIGAD LAAKQAQRNE FFIVGVDGSP DAEEALKREN SLFVATPAQD PQVMAAKAVE IGYDILQGKP APKEPVLIPV TMIDKNNVGN YKGWTVK
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