Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5588 |
Symbol | |
ID | 6970334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 5227450 |
End bp | 5228916 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643389224 |
Product | putative outer membrane efflux protein MdtP |
Protein accession | YP_002273621 |
Protein GI | 209399819 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAATC GTCAACTTTC ACGTCTGCTG TTGTGCAGCA TTCTCGGCAG CACGACGCTG ATTTCCGGCT GTGCCCTGGT ACGCAAGGAT TCTGCGCCTC ATCAACAGCT CAAACCGGAA CAAATCAAAC TGGCCGATGA TATTCATCTT GCCAGCTCCG GCTGGCCGCA GGCGCAGTGG TGGAAACAAC TCAATGACCC GCAGCTGGAT GCGCTGATCC AACGGACGCT AAGTGGTTCA CACACCCTCG CCGAAGCGAA ACTGCGGGAA GAAAAAGCGC AGTCCCAGGC CGATTTGTTA GATGCCGGTT CACAATTACA GGTCGCAGCG TTAGGGATGC TCAACCGCCA ACGCGTCTCG GCGAACGGCT TTTTAAGCCC TTATGCGATG GATGCGCCAG CACTGGGTAT GGACGGGCCG TACTATACGG AAGCCACAGT CGGTTTGTTT GCCGGACTGG ATCTTGATTT GTGGGGTGTG CATCGCTCAG CGGTTACCGC CGCCATTGGC GCGCATAATG CCGCGCTGGC AGAAACCGCA GCAGTAGAGC TATCGCTGAC CACGGGCGTA GCGCAGCTTT ATTACAGTAT GCAGGCCAGC TATCAGATGC TCGATCTGTT AGAACAAACT CGCGATGTGA TTGATTACGC GGTGAAAGCG CACCAAAGTA AAGTGGCGCA CGGTCTGGAA GCGCAAGTGC CTTTCCACGG CGCGCGGGCA CAGATTCTGG CGGTCGATAA ACAAATTGCT GCCGTTAAAG GGCAAATCAC CGAAACGCGA GAATCTCTGC GTGCATTGAT TGGCGCGGGA GCCAGCGATA TGCCGGAGAT CAAACCAGTG GCATTACCAC GAGTCCAGAC CGGTATTCCG GCGACACTCT CTTATGAGTT GCTCGCCAGA CGCCCGGATC TGCAAGCCAT GCGCTGGTAT GTTCAGGCGT CATTAGATCA GGTGGATTCC GCGCGGGCGC TGTTCTACCC AAGCTTTGAT ATCAAAGCGT TTTTCGGTCT GGACTCCATC CACCTGGATA CCTTATTCAA AAAAACCAGT CGCCAGTTCA ACTTCATCCC GGGTCTGAAA TTGCCGCTGT TTGACGGTGG ACGGTTGAAT GCCAATCTCG AAGGCACTCG CGCCGCCAGC AACATGATGA TTGAACGTTA CAACCAGTCA GTACTGAACG CGGTGCGTGA CGTTGCCGTC AACGGCACGC GTCTGCAAAC GCTCAACGAC GAGCGAGAAA TGCAGGCTGA ACGCGTGGAA GCAACGCGCT TCACCCAGCG CGCTGCCGAG GCCGCCTATC AGCGCGGCTT AACCAGCCGC TTACAGGCTA CCGAAGCCCG GTTGCCGGTG CTTGCCGAAG AGATGTCATT ACTGATGCTG GACAGCCGCC GGGTGATCCA AAGCATTCAG TTGATGAAAT CGCTGGGCAG CGGGTATCAG GCGGCTCCCG TCGTCGAGAA AAAATAA
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Protein sequence | MINRQLSRLL LCSILGSTTL ISGCALVRKD SAPHQQLKPE QIKLADDIHL ASSGWPQAQW WKQLNDPQLD ALIQRTLSGS HTLAEAKLRE EKAQSQADLL DAGSQLQVAA LGMLNRQRVS ANGFLSPYAM DAPALGMDGP YYTEATVGLF AGLDLDLWGV HRSAVTAAIG AHNAALAETA AVELSLTTGV AQLYYSMQAS YQMLDLLEQT RDVIDYAVKA HQSKVAHGLE AQVPFHGARA QILAVDKQIA AVKGQITETR ESLRALIGAG ASDMPEIKPV ALPRVQTGIP ATLSYELLAR RPDLQAMRWY VQASLDQVDS ARALFYPSFD IKAFFGLDSI HLDTLFKKTS RQFNFIPGLK LPLFDGGRLN ANLEGTRAAS NMMIERYNQS VLNAVRDVAV NGTRLQTLND EREMQAERVE ATRFTQRAAE AAYQRGLTSR LQATEARLPV LAEEMSLLML DSRRVIQSIQ LMKSLGSGYQ AAPVVEKK
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