Gene ECH74115_5562 details

Gene Information

• Locus tag: ECH74115_5562
• Symbol: ssb
• ID: 6969843
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli O157:H7 str. EC4115
• Kingdom: Bacteria
• Replicon accession: NC_011353
• Strand: +
• Start bp: 5202473
• End bp: 5203009
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643389202
• Product: single-stranded DNA-binding protein
• Protein accession: YP_002273599
• Protein GI: 209397137
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.214992
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 66
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCAGCA GAGGCGTAAA CAAGGTTATT CTCGTTGGTA ATCTGGGTCA GGACCCGGAA 
GTACGCTACA TGCCAAATGG TGGCGCAGTT GCCAACATTA CGCTGGCTAC TTCCGAATCC 
TGGCGTGATA AAGCGACCGG CGAGATGAAA GAGCAGACTG AATGGCACCG CGTTGTGCTG 
TTCGGCAAAC TGGCAGAAGT GGCCAGCGAA TATCTGCGTA AAGGTTCTCA GGTTTATATC 
GAAGGTCAGC TGCGTACCCG TAAATGGACC GATCAATCCG GTCAGGATCG CTACACCACA 
GAAGTCGTGG TGAACGTTGG CGGCACCATG CAGATGCTGG GTGGTCGTCA GGGTGGTGGC 
GCTCCTGCAG GTGGCAATAT CGGTGGTGGT CAGCCGCAGG GTGGTTGGGG TCAGCCTCAG 
CAGCCGCAGG GTGGCAATCA GTTCAGCGGC GGCGCGCAGT CTCGCCCGCA GCAGTCCGCT 
CCGGCAGCGC CGTCTAACGA GCCGCCGATG GACTTTGATG ACGATATTCC GTTCTGA 

 

Protein sequence

MASRGVNKVI LVGNLGQDPE VRYMPNGGAV ANITLATSES WRDKATGEMK EQTEWHRVVL 
FGKLAEVASE YLRKGSQVYI EGQLRTRKWT DQSGQDRYTT EVVVNVGGTM QMLGGRQGGG 
APAGGNIGGG QPQGGWGQPQ QPQGGNQFSG GAQSRPQQSA PAAPSNEPPM DFDDDIPF