| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5561 |
|---|
| Symbol | uvrA |
|---|
| ID | 6970559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 5199396 |
|---|
| End bp | 5202218 |
|---|
| Gene Length | 2823 bp |
|---|
| Protein Length | 940 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643389201 |
|---|
| Product | excinuclease ABC subunit A |
|---|
| Protein accession | YP_002273598 |
|---|
| Protein GI | 209398765 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.543966 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGA TCGAAGTTCG GGGCGCCCGC ACCCATAATC TCAAAAACAT CAACCTCGTT
ATCCCCCGCG ACAAGCTCAT TGTCGTGACC GGGCTTTCGG GTTCTGGCAA ATCCTCGCTC
GCTTTCGACA CCTTATATGC CGAAGGGCAG CGCCGTTACG TTGAATCCCT TTCCGCCTAC
GCGCGGCAGT TTCTGTCACT GATGGAAAAG CCGGACGTCG ATCATATTGA GGGGCTTTCT
CCTGCCATCT CAATTGAGCA GAAATCGACG TCTCATAACC CGCGTTCTAC GGTGGGGACA
ATCACCGAAA TCCACGACTA TTTGCGTTTG TTGTACGCCC GCGTCGGCGA ACCGCGCTGT
CCGGACCACG ACGTCCCGCT GGCGGCGCAA ACCGTCAGCC AGATGGTGGA TAACGTGCTG
TCGCAGCCGG AAGGCAAGCG TCTGATGCTG CTCGCGCCAA TCATTAAAGA GCGCAAAGGC
GAACACACCA AAACGCTGGA GAACCTGGCA AGCCAGGGTT ACATCCGTGC TCGTATTGAT
GGCGAAGTCT GCGATCTTTC CGATCCGCCG AAACTGGAAC TGCAAAAGAA ACACACTATT
GAAGTGGTGG TTGATCGCTT CAAGGTGCGT GACGATCTTA CCCAACGTCT TGCCGAGTCG
TTTGAAACCG CGCTGGAGCT TTCCGGTGGT ACCGCGGTAG TGGCGGATAT GGACGACCCG
AAAGCGGAAG AGCTGCTGTT TTCCGCCAAC TTCGCCTGCC CAATTTGCGG CTACAGTATG
CGTGAACTGG AGCCGCGACT GTTTTCGTTT AACAACCCGG CAGGTGCCTG CCCGACCTGC
GACGGCCTTG GCGTACAGCA ATATTTCGAT CCTGACCGCG TGATCCAGAA TCCGGAACTG
TCGCTGGCAG GTGGTGCGAT CCGTGGCTGG GATCGCCGCA ACTTCTATTA TTTCCAGATG
CTGAAATCGC TGGCAGATCA CTATAAGTTC GACGTCGAAG CGCCGTGGGG CAGCCTGAGC
GCGAACGTGC ATAAAGTGGT GTTGTACGGT TCTGGCAAAG AAAACATTGA ATTCAAATAC
ATGAACGATC GTGGCGATAC CTCCATCCGT CGTCATCCGT TCGAAGGCGT GCTGCACAAT
ATGGAGCGCC GTTATAAAGA GACAGAATCC AGTGCGGTAC GTGAAGAATT AGCCAAGTTC
ATCAGCAATC GCCCGTGCGC CAGCTGCGAA GGGACGCGTC TGCGTCGGGA AGCGCGCCAC
GTGTATGTCG AGAATACGCC GCTGCCCGCC ATCTCCGACA TGAGCATTGG TCATGCGATG
GAATTCTTCA ACAATCTCAA ACTCGCAGGT CAGCGGGCGA AGATTGCGGA AAAAATTCTT
AAAGAGATCG GCGATCGTTT GAAATTCCTC GTTAACGTCG GCCTGAATTA CCTGACGCTT
TCCCGCTCGG CAGAAACGCT TTCCGGCGGT GAAGCCCAGC GTATCCGTCT GGCGAGCCAG
ATTGGTGCGG GCCTGGTTGG CGTTATGTAC GTGCTGGATG AGCCGTCTAT CGGCCTGCAC
CAGCGCGATA ACGAGCGCCT GTTGGGTACG CTTATCCATC TGCGCGATCT CGGTAATACC
GTGATTGTGG TGGAGCACGA CGAAGACGCG ATTCGCGCCG CTGATCATGT GATCGATATC
GGTCCTGGTG CAGGTGTACA TGGCGGTGAA GTGGTCGCGG AAGGTCCGCT GGAAGCGATT
ATGGCGGTGC CGGAGTCGTT GACCGGACAG TACATGAGCG GTAAACGCAA GATTGAAGTG
CCGAAGAAAC GCGTTCCGGC GAATCCGGAA AAAGTACTTA AGCTGACTGG CGCACGCGGC
AACAACCTGA AAGACGTGAC GCTAACGCTG CCAGTCGGTC TGTTTACCTG CATCACAGGG
GTTTCAGGTT CCGGTAAATC GACGCTGATT AACGACACAC TGTTCCCGAT TGCCCAACGC
CAGTTGAATG GTGCGACCAT CGCCGAACCG GCACCGTATC GCGATATTCA GGGACTGGAG
CATTTCGACA AAGTAATCGA TATCGACCAA AGCCCAATTG GTCGTACTCC GCGTTCTAAC
CCGGCGACCT ATACCGGCGT GTTTACGCCT GTGCGCGAAC TGTTTGCGGG CGTACCGGAA
TCCCGTGCGC GTGGTTATAC GCCAGGACGT TTCAGCTTTA ACGTCCGTGG CGGACGCTGC
GAGGCCTGTC AGGGCGATGG CGTGATCAAA GTGGAGATGC ACTTCCTGCC GGACATTTAC
GTGCCGTGCG ACCAGTGCAA AGGTAAACGC TATAACCGTG AAACGCTGGA GATTAAGTAC
AAAGGCAAAA CCATCCACGA AGTGCTGGAT ATGACCATCG AAGAGGCGCG TGAGTTCTTT
GATGCGGTGC CAGCTCTGGC GCGTAAGCTG CAAACGTTGA TGGACGTTGG TCTGACGTAC
ATTCGCTTGG GGCAGTCCGC AACCACACTT TCTGGTGGTG AAGCCCAGCG CGTGAAGCTG
GCGCGTGAGC TGTCAAAACG CGGCACCGGG CAGACGCTGT ATATTCTCGA CGAGCCGACC
ACCGGTCTGC ACTTCGCCGA TATTCAGCAA CTGCTCGACG TACTGCATAA ACTGCGCGAT
CAGGGCAACA CCATTGTGGT GATTGAGCAC AATCTCGACG TGATTAAAAC CGCTGACTGG
ATTGTCGACC TGGGGCCGGA AGGCGGCAGT GGCGGCGGCG AGATCCTCGT CTCCGGTACG
CCAGAAACCG TCGCGGAGTG CGAAGCTTCG CATACGGCAC GCTTCCTCAA GCCGATGCTG
TAA
|
|---|
| Protein sequence | MDKIEVRGAR THNLKNINLV IPRDKLIVVT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLSLMEK PDVDHIEGLS PAISIEQKST SHNPRSTVGT ITEIHDYLRL LYARVGEPRC
PDHDVPLAAQ TVSQMVDNVL SQPEGKRLML LAPIIKERKG EHTKTLENLA SQGYIRARID
GEVCDLSDPP KLELQKKHTI EVVVDRFKVR DDLTQRLAES FETALELSGG TAVVADMDDP
KAEELLFSAN FACPICGYSM RELEPRLFSF NNPAGACPTC DGLGVQQYFD PDRVIQNPEL
SLAGGAIRGW DRRNFYYFQM LKSLADHYKF DVEAPWGSLS ANVHKVVLYG SGKENIEFKY
MNDRGDTSIR RHPFEGVLHN MERRYKETES SAVREELAKF ISNRPCASCE GTRLRREARH
VYVENTPLPA ISDMSIGHAM EFFNNLKLAG QRAKIAEKIL KEIGDRLKFL VNVGLNYLTL
SRSAETLSGG EAQRIRLASQ IGAGLVGVMY VLDEPSIGLH QRDNERLLGT LIHLRDLGNT
VIVVEHDEDA IRAADHVIDI GPGAGVHGGE VVAEGPLEAI MAVPESLTGQ YMSGKRKIEV
PKKRVPANPE KVLKLTGARG NNLKDVTLTL PVGLFTCITG VSGSGKSTLI NDTLFPIAQR
QLNGATIAEP APYRDIQGLE HFDKVIDIDQ SPIGRTPRSN PATYTGVFTP VRELFAGVPE
SRARGYTPGR FSFNVRGGRC EACQGDGVIK VEMHFLPDIY VPCDQCKGKR YNRETLEIKY
KGKTIHEVLD MTIEEAREFF DAVPALARKL QTLMDVGLTY IRLGQSATTL SGGEAQRVKL
ARELSKRGTG QTLYILDEPT TGLHFADIQQ LLDVLHKLRD QGNTIVVIEH NLDVIKTADW
IVDLGPEGGS GGGEILVSGT PETVAECEAS HTARFLKPML
|
|---|
| |