| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5462 |
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| Symbol | thiC |
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| ID | 6969670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 5106142 |
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| End bp | 5108037 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643389109 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_002273510 |
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| Protein GI | 209399239 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.416651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAA CAAAACTGAC CCGTCGCGAA CAACGCGCCC AGGCCCAACA TTTTATCGAC
ACCCTGGAAG GCACCGCCTT TCCCAACTCA AAACGCATTT ATATCACTGG CACACAACCC
GGCGTGCGCG TGCCGATGCG TGAGATCCAG CTTAGCCCGA CGCTAATTGG CGGTAGCAAA
GAACAGCCGC AGTACGAAGA AAACGAAGCG ATTCCGGTCT ACGACACCTC CGGCCCGTAT
GGCGATCCGC AGATCGCCAT TAACGTGCAG CAAGGGCTGG CAAAACTACG CCAGCCGTGG
ATCGATGCGC GCGGCGATAC CGAAGAACTT ACCGTGCGCA GTTCCGATTA CACTAAAGCG
CGGCTGGCAG ATGATGGCCT CGACGAGCTG CGTTTTAGCG GCGTATTAAC GCCAAAACGC
GCCAAAGCAG GACGCCGCGT CACACAACTG CACTACGCCC GCCAGGGCAT CATCACACCG
GAAATGGAAT TCATCGCCAT CCGCGAGAAT ATGGGCCGCG AGCGCATCCG TAGCGAAGTT
TTACGCCACC AGCATCCGGG AATGAGCTTT GGCGCACGTC TGCCGGAAAA TATCACTGCG
GAATTTGTCC GTGATGAAGT TGCTGCCGGA CGTGCGATTA TCCCGGCCAA CATTAATCAT
CCGGAATCGG AGCCGATGAT TATTGGTCGC AATTTCCTGG TAAAAGTTAA CGCCAATATC
GGCAACTCGG CGGTCACCTC TTCCATCGAA GAAGAAGTGG AAAAGCTGGT ATGGTCCACG
CGCTGGGGAG CGGATACGGT GATGGATCTC TCCACCGGTC GCTATATTCA CGAAACCCGC
GAGTGGATTT TGCGTAACAG CCCGGTGCCG ATTGGTACAG TGCCGATCTA CCAGGCGCTG
GAGAAGGTTA ATGGGATCGC CGAAGATCTT ACCTGGGAAG CGTTCCGCGA CACGCTGCTG
GAACAGGCCG AGCAAGGTGT GGATTACTTC ACTATCCATG CGGGGGTGCT GCTGCGCTAT
GTGCCGATGA CCGCGAAACG CCTGACCGGT ATCGTCTCGC GCGGCGGTTC GATTATGGCG
AAATGGTGCC TCTCCCATCA TCAGGAAAAT TTCCTCTATC AACACTTCCG CGAAATTTGT
GAAATCTGTG CCGCTTATGA CGTTTCGCTG TCGCTGGGCG ACGGTCTGCG CCCCGGTTCT
ATTCAGGACG CCAACGATGA AGCGCAGTTT GCCGAGCTGC ATACGCTGGG CGAACTGACA
AAAATCGCCT GGGAATATGA TGTGCAGGTG ATGATTGAAG GCCCAGGCCA CGTGCCGATG
CAGATGATCC GCCGCAATAT GACCGAGGAG TTAGAGCACT GCCACGAAGC GCCGTTTTAC
ACTCTGGGGC CGCTAACTAC CGATATTGCG CCGGGCTATG ACCACTTCAC GTCGGGGATT
GGTGCGGCGA TGATTGGCTG GTTTGGCTGC GCGATGCTCT GTTACGTAAC GCCAAAAGAG
CATCTGGGTC TGCCTAATAA AGAAGATGTT AAGCAGGGGC TTATCACCTA TAAGATTGCC
GCCCACGCCG CTGACCTGGC GAAAGGGCAT CCGGGCGCAC AAATTCGCGA TAACGCCATG
TCGAAAGCCC GCTTCGAATT TCGCTGGGAA GACCAGTTTA ATCTGGCCCT CGACCCGTTT
ACCGCCCGCG CTTATCACGA TGAAACCCTG CCGCAAGAGT CAGGTAAAGT CGCCCATTTT
TGCTCCATGT GTGGGCCGAA ATTCTGCTCG ATGAAAATCA GCCAGGAAGT GCGTGATTAC
GCCGCCACGC AAACTATTGA AATGGGAATA GCGGATATGT CGGAGAACTT CCGTGCCAGA
GGCGGAGAAA TCTACCTGCG TAAGGAGGAA GCGTGA
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| Protein sequence | MSATKLTRRE QRAQAQHFID TLEGTAFPNS KRIYITGTQP GVRVPMREIQ LSPTLIGGSK
EQPQYEENEA IPVYDTSGPY GDPQIAINVQ QGLAKLRQPW IDARGDTEEL TVRSSDYTKA
RLADDGLDEL RFSGVLTPKR AKAGRRVTQL HYARQGIITP EMEFIAIREN MGRERIRSEV
LRHQHPGMSF GARLPENITA EFVRDEVAAG RAIIPANINH PESEPMIIGR NFLVKVNANI
GNSAVTSSIE EEVEKLVWST RWGADTVMDL STGRYIHETR EWILRNSPVP IGTVPIYQAL
EKVNGIAEDL TWEAFRDTLL EQAEQGVDYF TIHAGVLLRY VPMTAKRLTG IVSRGGSIMA
KWCLSHHQEN FLYQHFREIC EICAAYDVSL SLGDGLRPGS IQDANDEAQF AELHTLGELT
KIAWEYDVQV MIEGPGHVPM QMIRRNMTEE LEHCHEAPFY TLGPLTTDIA PGYDHFTSGI
GAAMIGWFGC AMLCYVTPKE HLGLPNKEDV KQGLITYKIA AHAADLAKGH PGAQIRDNAM
SKARFEFRWE DQFNLALDPF TARAYHDETL PQESGKVAHF CSMCGPKFCS MKISQEVRDY
AATQTIEMGI ADMSENFRAR GGEIYLRKEE A
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