| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5446 |
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| Symbol | secE |
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| ID | 6972187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 5089488 |
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| End bp | 5089871 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643389096 |
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| Product | preprotein translocase subunit SecE |
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| Protein accession | YP_002273497 |
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| Protein GI | 209396026 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000383194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0067856 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGTGCGA ATACCGAAGC TCAAGGAAGC GGGCGCGGCC TGGAAGCGAT GAAGTGGGTC
GTTGTGGTGG CATTGCTCTT GGTGGCGATT GTCGGCAACT ATCTTTATCG CGACATTATG
CTGCCGCTGC GTGCGCTGGC CGTAGTAATT CTGATTGCTG CAGCGGGTGG TGTCGCGCTG
TTAACGACAA AAGGTAAAGC TACCGTTGCT TTTGCCCGTG AAGCGCGTAC CGAAGTCCGT
AAGGTCATTT GGCCGACTCG CCAGGAAACA TTGCACACCA CGCTGATTGT GGCTGCGGTT
ACCGCAGTAA TGTCACTGAT CCTGTGGGGA CTGGATGGTA TTCTGGTTCG CCTGGTATCC
TTTATCACTG GCCTGAGGTT CTGA
|
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| Protein sequence | MSANTEAQGS GRGLEAMKWV VVVALLLVAI VGNYLYRDIM LPLRALAVVI LIAAAGGVAL
LTTKGKATVA FAREARTEVR KVIWPTRQET LHTTLIVAAV TAVMSLILWG LDGILVRLVS
FITGLRF
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