Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5430 |
Symbol | btuB |
ID | 6968480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5076017 |
End bp | 5077861 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643389081 |
Product | vitamin B12/cobalamin outer membrane transporter |
Protein accession | YP_002273490 |
Protein GI | 209398063 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0043717 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0207602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAA AAGCTTCGCT GCTGACGGCG TGTTCTGTCA CAGCCTTTTC CGCTTGGGCA CAGGATACCA GCCCGGATAC TCTCGTCGTT ACTGCTAACC GTTTTGAACA GCCGCGCAGC ACTGTGCTTG CACCAACCAC CGTTGTGACG CGTCAGGATA TCGACCGCTG GCAGTCGACC TCGGTTAATG ATGTGCTGCG CCGTCTTCCG GGCGTCGATA TCACCCAAAA CGGCGGTTCA GGTCAGCTCT CATCTATTTT TATTCGCGGT ACAAATGCCA GTCATGTGTT GGTGTTAATT GATGGCGTAC GCCTGAATCT GGCGGGGGGG AGTGGTTCTG CCGACCTTAG CCAGTTCCCT ATTGCGCTTG TCCAGCGTGT TGAATATATC CGTGGGCCAC GCTCCGCCGT TTATGGTTCC GATGCAATAG GTGGGGTGGT GAATATCATC ACGACGCGCG ATGAACCCGG AACGGAAATT TCAGCAGGGT GGGGAAGCAA TAGTTATCAA AACTATGATG TCTCTACACA GCAACAACTG GGGGATAAGA CACGAGTAAC GTTGTTGGGC GATTATGCCC ATACTCATGG TTATGATGTT GTTGCCTATG GTAATACCGG AACGCAAGCG CAGCCAGATA ACGATGGTTT TTTAAGTAAA ACGCTTTATG GCGCGCTGGA GCATAACTTT ACTGATGCCT GGAGCGGCTT TGTGCGCGGC TATGGCTATG ATAACCGTAC CAATTATGAC GCGTATTATT CTCCGGGTTC ACCATTGGTC GATACCCGTA AACTCTATAG TCAAAGTTGG GACGCCGGGC TGCGATATAA CGGCGAACTG ATTAAATCAC AACTCATTAC CAGCTATAGC CATAGCAAAG ATTACAACTA CGATCCCCAT TATGGTCGTT ATGATTCGTC GGCGACGCTC GATGAGATGA AGCAATACAC CGTCCAGTGG GCAAACAACA TCATCATTGG CCACGGTAAT GTTGGTGCGG GTGTTGACTG GCAGAAGCAG AGCACGGCAC CGGGCACAGC TTATGTTAAG GATGGATATG ATCAACGTAA TACCGGCATC TATCTGACCG GGCTGCAACA AGTCGGCGAT TTTACCTTTG AAGGCGCAGC ACGCAGCGAC GATAACTCAC AGTTTGGTCG TCATGGAACC TGGCAAACCA GCGCCGGTTG GGAATTCATC GAAGGTTATC GCTTCATTGC TTCCTACGGG ACATCTTATA AGGCACCAAA TCTGGGGCAA CTGTATGGCT TCTACGGAAA TCCGAATCTG GACCCGGAGA AAAGCAAACA GTGGGAAGGC GCGTTTGAAG GCTTAACCGC TGGGGTGAAC TGGCGTATTT CCGGATATCG TAACGATGTC AGTGACTTGA TCGATTATGA TGATCACACC CTGAAATATT ACAACGAAGG GAAAGCGCGG ATTAAGGGCG TCGAGGCGAC CGCCAATTTT GATACCGGAC CACTGACGCA TACTGTGAGT TATGATTATG TCGATGCGCG CAATGCAATT ACCGACACGC CGTTGTTACG CCGTGCTAAA CAGCAGGTGA AATACCAGCT CGACTGGCAG TTGTATGACT TCGACTGGGG TATTACTTAT CAGTATTTAG GCACTCGCTA TGATAAGGAT TACTCATCTT ATCCTTATCA AACCGTTAAA ATGGGCGGTG TGAGCTTGTG GGATCTTGCG GTTGCGTATC CGGTCACCTC TCACCTGACA GTTCGTGGTA AAATAGCCAA CCTGTTCGAC AAAGATTATG AGACAGTCTA TGGCTACCAA ACTGCAGGAC GGGAATACAC CTTGTCTGGC AGCTACACCT TCTGA
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Protein sequence | MIKKASLLTA CSVTAFSAWA QDTSPDTLVV TANRFEQPRS TVLAPTTVVT RQDIDRWQST SVNDVLRRLP GVDITQNGGS GQLSSIFIRG TNASHVLVLI DGVRLNLAGG SGSADLSQFP IALVQRVEYI RGPRSAVYGS DAIGGVVNII TTRDEPGTEI SAGWGSNSYQ NYDVSTQQQL GDKTRVTLLG DYAHTHGYDV VAYGNTGTQA QPDNDGFLSK TLYGALEHNF TDAWSGFVRG YGYDNRTNYD AYYSPGSPLV DTRKLYSQSW DAGLRYNGEL IKSQLITSYS HSKDYNYDPH YGRYDSSATL DEMKQYTVQW ANNIIIGHGN VGAGVDWQKQ STAPGTAYVK DGYDQRNTGI YLTGLQQVGD FTFEGAARSD DNSQFGRHGT WQTSAGWEFI EGYRFIASYG TSYKAPNLGQ LYGFYGNPNL DPEKSKQWEG AFEGLTAGVN WRISGYRNDV SDLIDYDDHT LKYYNEGKAR IKGVEATANF DTGPLTHTVS YDYVDARNAI TDTPLLRRAK QQVKYQLDWQ LYDFDWGITY QYLGTRYDKD YSSYPYQTVK MGGVSLWDLA VAYPVTSHLT VRGKIANLFD KDYETVYGYQ TAGREYTLSG SYTF
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