Gene ECH74115_5317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5317 
SymboltypA 
ID6971248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4957321 
End bp4959144 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content53% 
IMG OID643388978 
ProductGTP-binding protein 
Protein accessionYP_002273387 
Protein GI209398166 
COG category[T] Signal transduction mechanisms 
COG ID[COG1217] Predicted membrane GTPase involved in stress response 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU
[TIGR01394] GTP-binding protein TypA/BipA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.818778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.46525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAAA AATTGCGTAA TATCGCCATC ATCGCGCACG TAGACCATGG TAAAACCACC 
CTGGTAGACA AGCTGCTCCA ACAATCCGGT ACGTTCGACT CTCGTGCCGA AACCCAAGAG
CGCGTGATGG ACTCCAACGA TTTGGAGAAA GAGCGTGGGA TTACCATCCT CGCGAAAAAC
ACCGCTATCA AATGGAATGA TTACCGTATC AACATCGTTG ATACCCCGGG GCACGCCGAC
TTCGGTGGTG AAGTTGAACG TGTAATGTCC ATGGTAGACT CAGTGCTGCT GGTGGTTGAC
GCATTTGACG GCCCGATGCC GCAAACGCGC TTCGTAACCA AAAAAGCGTT TGCTTACGGC
CTGAAGCCGA TTGTTGTTAT CAACAAAGTT GACCGCCCTG GCGCGCGTCC TGATTGGGTT
GTGGATCAGG TATTCGATCT GTTCGTTAAC CTCGACGCGA CCGACGAGCA GCTGGACTTC
CCGATCGTTT ACGCTTCTGC GCTGAACGGT ATCGCGGGTC TGGACCACGA AGATATGGCG
GAAGACATGA CCCCGCTGTA CCAGGCGATT GTTGACCACG TTCCTGCGCC GGACGTTGAC
CTTGACGGTC CGTTCCAGAT GCAGATTTCT CAGCTCGATT ACAACAGCTA TGTTGGCGTT
ATCGGCATTG GCCGCATCAA GCGCGGTAAA GTGAAGCCGA ACCAGCAGGT TACTATCATC
GATAGCGAAG GCAAAACCCG CAACGCGAAA GTTGGTAAAG TGCTGGGCCA CCTCGGTCTG
GAACGTATCG AAACCGATCT GGCGGAAGCT GGCGATATCG TGGCGATCAC GGGCCTGGGC
GAACTGAACA TTTCTGACAC CGTTTGCGAC ACGCAAAACG TTGAAGCGCT GCCGGCACTC
TCCGTTGATG AGCCGACCGT TTCTATGTTC TTCTGCGTTA ACACCTCGCC GTTCTGCGGT
AAAGAAGGTA AGTTCGTAAC GTCTCGTCAG ATCCTGGATC GTCTGAACAA AGAACTGGTA
CACAACGTTG CGCTGCGCGT AGAAGAAACC GAAGACGCCG ATGCGTTCCG CGTTTCTGGT
CGTGGCGAAC TGCACCTGTC TGTTCTGATC GAAAACATGC GTCGTGAAGG TTTCGAACTG
GCGGTATCCC GTCCGAAAGT TATCTTCCGT GAAATCGACG GTCGTAAACA AGAGCCGTAT
GAAAACGTGA CTCTGGACGT TGAAGAACAG CATCAGGGTT CTGTAATGCA GGCGCTGGGC
GAACGTAAAG GCGACCTGAA AAACATGAAT CCAGACGGTA AAGGCCGCGT ACGTCTCGAC
TACGTGATCC CAAGCCGTGG TCTGATTGGC TTCCGTTCTG AGTTCATGAC CATGACTTCC
GGTACGGGTC TGCTGTACTC CACCTTCAGC CACTACGACG ACGTGCGTCC GGGTGAAGTG
GGTCAGCGTC AGAACGGCGT ACTGATCTCT AACGGTCAGG GTAAAGCGGT CGCGTTCGCG
CTGTTCGGTT TGCAGGATCG CGGTAAGCTG TTCCTCGGTC ACGGTGCAGA AGTTTACGAA
GGTCAGATTA TCGGTATTCA TAGCCGCTCT AACGACCTGA CTGTAAACTG CCTGACCGGT
AAGAAACTGA CCAACATGCG TGCTTCCGGT ACTGACGAAG CCGTTGTTCT GGTTCCGCCT
ATCCGCATGA CTCTGGAACA AGCTCTGGAG TTCATCGATG ATGACGAACT GGTAGAAGTG
ACTCCGACCT CTATCCGTAT TCGTAAACGT CACCTGACGG AAAACGATCG TCGTCGCGCC
AACCGCGCAC CGAAAGACGA TTAA
 
Protein sequence
MIEKLRNIAI IAHVDHGKTT LVDKLLQQSG TFDSRAETQE RVMDSNDLEK ERGITILAKN 
TAIKWNDYRI NIVDTPGHAD FGGEVERVMS MVDSVLLVVD AFDGPMPQTR FVTKKAFAYG
LKPIVVINKV DRPGARPDWV VDQVFDLFVN LDATDEQLDF PIVYASALNG IAGLDHEDMA
EDMTPLYQAI VDHVPAPDVD LDGPFQMQIS QLDYNSYVGV IGIGRIKRGK VKPNQQVTII
DSEGKTRNAK VGKVLGHLGL ERIETDLAEA GDIVAITGLG ELNISDTVCD TQNVEALPAL
SVDEPTVSMF FCVNTSPFCG KEGKFVTSRQ ILDRLNKELV HNVALRVEET EDADAFRVSG
RGELHLSVLI ENMRREGFEL AVSRPKVIFR EIDGRKQEPY ENVTLDVEEQ HQGSVMQALG
ERKGDLKNMN PDGKGRVRLD YVIPSRGLIG FRSEFMTMTS GTGLLYSTFS HYDDVRPGEV
GQRQNGVLIS NGQGKAVAFA LFGLQDRGKL FLGHGAEVYE GQIIGIHSRS NDLTVNCLTG
KKLTNMRASG TDEAVVLVPP IRMTLEQALE FIDDDELVEV TPTSIRIRKR HLTENDRRRA
NRAPKDD