Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5317 |
Symbol | typA |
ID | 6971248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4957321 |
End bp | 4959144 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643388978 |
Product | GTP-binding protein |
Protein accession | YP_002273387 |
Protein GI | 209398166 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.818778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.46525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGAAA AATTGCGTAA TATCGCCATC ATCGCGCACG TAGACCATGG TAAAACCACC CTGGTAGACA AGCTGCTCCA ACAATCCGGT ACGTTCGACT CTCGTGCCGA AACCCAAGAG CGCGTGATGG ACTCCAACGA TTTGGAGAAA GAGCGTGGGA TTACCATCCT CGCGAAAAAC ACCGCTATCA AATGGAATGA TTACCGTATC AACATCGTTG ATACCCCGGG GCACGCCGAC TTCGGTGGTG AAGTTGAACG TGTAATGTCC ATGGTAGACT CAGTGCTGCT GGTGGTTGAC GCATTTGACG GCCCGATGCC GCAAACGCGC TTCGTAACCA AAAAAGCGTT TGCTTACGGC CTGAAGCCGA TTGTTGTTAT CAACAAAGTT GACCGCCCTG GCGCGCGTCC TGATTGGGTT GTGGATCAGG TATTCGATCT GTTCGTTAAC CTCGACGCGA CCGACGAGCA GCTGGACTTC CCGATCGTTT ACGCTTCTGC GCTGAACGGT ATCGCGGGTC TGGACCACGA AGATATGGCG GAAGACATGA CCCCGCTGTA CCAGGCGATT GTTGACCACG TTCCTGCGCC GGACGTTGAC CTTGACGGTC CGTTCCAGAT GCAGATTTCT CAGCTCGATT ACAACAGCTA TGTTGGCGTT ATCGGCATTG GCCGCATCAA GCGCGGTAAA GTGAAGCCGA ACCAGCAGGT TACTATCATC GATAGCGAAG GCAAAACCCG CAACGCGAAA GTTGGTAAAG TGCTGGGCCA CCTCGGTCTG GAACGTATCG AAACCGATCT GGCGGAAGCT GGCGATATCG TGGCGATCAC GGGCCTGGGC GAACTGAACA TTTCTGACAC CGTTTGCGAC ACGCAAAACG TTGAAGCGCT GCCGGCACTC TCCGTTGATG AGCCGACCGT TTCTATGTTC TTCTGCGTTA ACACCTCGCC GTTCTGCGGT AAAGAAGGTA AGTTCGTAAC GTCTCGTCAG ATCCTGGATC GTCTGAACAA AGAACTGGTA CACAACGTTG CGCTGCGCGT AGAAGAAACC GAAGACGCCG ATGCGTTCCG CGTTTCTGGT CGTGGCGAAC TGCACCTGTC TGTTCTGATC GAAAACATGC GTCGTGAAGG TTTCGAACTG GCGGTATCCC GTCCGAAAGT TATCTTCCGT GAAATCGACG GTCGTAAACA AGAGCCGTAT GAAAACGTGA CTCTGGACGT TGAAGAACAG CATCAGGGTT CTGTAATGCA GGCGCTGGGC GAACGTAAAG GCGACCTGAA AAACATGAAT CCAGACGGTA AAGGCCGCGT ACGTCTCGAC TACGTGATCC CAAGCCGTGG TCTGATTGGC TTCCGTTCTG AGTTCATGAC CATGACTTCC GGTACGGGTC TGCTGTACTC CACCTTCAGC CACTACGACG ACGTGCGTCC GGGTGAAGTG GGTCAGCGTC AGAACGGCGT ACTGATCTCT AACGGTCAGG GTAAAGCGGT CGCGTTCGCG CTGTTCGGTT TGCAGGATCG CGGTAAGCTG TTCCTCGGTC ACGGTGCAGA AGTTTACGAA GGTCAGATTA TCGGTATTCA TAGCCGCTCT AACGACCTGA CTGTAAACTG CCTGACCGGT AAGAAACTGA CCAACATGCG TGCTTCCGGT ACTGACGAAG CCGTTGTTCT GGTTCCGCCT ATCCGCATGA CTCTGGAACA AGCTCTGGAG TTCATCGATG ATGACGAACT GGTAGAAGTG ACTCCGACCT CTATCCGTAT TCGTAAACGT CACCTGACGG AAAACGATCG TCGTCGCGCC AACCGCGCAC CGAAAGACGA TTAA
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Protein sequence | MIEKLRNIAI IAHVDHGKTT LVDKLLQQSG TFDSRAETQE RVMDSNDLEK ERGITILAKN TAIKWNDYRI NIVDTPGHAD FGGEVERVMS MVDSVLLVVD AFDGPMPQTR FVTKKAFAYG LKPIVVINKV DRPGARPDWV VDQVFDLFVN LDATDEQLDF PIVYASALNG IAGLDHEDMA EDMTPLYQAI VDHVPAPDVD LDGPFQMQIS QLDYNSYVGV IGIGRIKRGK VKPNQQVTII DSEGKTRNAK VGKVLGHLGL ERIETDLAEA GDIVAITGLG ELNISDTVCD TQNVEALPAL SVDEPTVSMF FCVNTSPFCG KEGKFVTSRQ ILDRLNKELV HNVALRVEET EDADAFRVSG RGELHLSVLI ENMRREGFEL AVSRPKVIFR EIDGRKQEPY ENVTLDVEEQ HQGSVMQALG ERKGDLKNMN PDGKGRVRLD YVIPSRGLIG FRSEFMTMTS GTGLLYSTFS HYDDVRPGEV GQRQNGVLIS NGQGKAVAFA LFGLQDRGKL FLGHGAEVYE GQIIGIHSRS NDLTVNCLTG KKLTNMRASG TDEAVVLVPP IRMTLEQALE FIDDDELVEV TPTSIRIRKR HLTENDRRRA NRAPKDD
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