Gene ECH74115_5287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5287 
Symbol 
ID6969464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4931724 
End bp4932341 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content56% 
IMG OID643388951 
Producthypothetical protein 
Protein accessionYP_002273365 
Protein GI209400622 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00411387 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.00913074 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATGGAAA GCTGGTTAAT TCCTGCGGCA CCGGTCACGG TCGTTGAAGA GATCAAAAAA 
AGCCGCTTCA TTACGCTGTT GGCGCATACC GATGGCGTTG AGGCGGCGAA AGCGTTTGTT
GAATCGGTGC GGGCAGAACA CCCCGATGCC CGCCACCATT GCGTGGCGTG GGTGGCGGGT
GCGCCGGATG ATTCTCAACA GCTGGGTTTC TCTGACGACG GGGAGCCGGC GGGAACGGCA
GGTAAACCGA TGCTCGCCCA GCTAATGGGC AGCGGCGTTG GGGAAATTAC CGCTGTGGTG
GTGCGCTACT ACGGCGGCAT ATTGCTTGGC ACCGGTGGGT TAGTGAAAGC GTATGGCGGC
GGCGTGAATC AGGCGCTGCG CCAGCTAACG ACCCAACGCA AGACGCCATT AACCGAATAT
ACTTTGCAAT GTGAATATAG TCAGTTAACC GGCATTGAAG CGTTGCTGGG GCAGTGTGAC
GGCAAAATTA TCAACAGTGA TTATCAGGCA TTCGTTCTGC TGCGGGTGGC GCTTCCGGCG
GCGAAAGTGG CTGAATTTTC CGCGAAGCTG GCGGATTTTA GCCGTGGTTC ATTGCAATTG
TTAGCGATTG AAGAATAA
 
Protein sequence
MMESWLIPAA PVTVVEEIKK SRFITLLAHT DGVEAAKAFV ESVRAEHPDA RHHCVAWVAG 
APDDSQQLGF SDDGEPAGTA GKPMLAQLMG SGVGEITAVV VRYYGGILLG TGGLVKAYGG
GVNQALRQLT TQRKTPLTEY TLQCEYSQLT GIEALLGQCD GKIINSDYQA FVLLRVALPA
AKVAEFSAKL ADFSRGSLQL LAIEE