| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5266 |
|---|
| Symbol | pldB |
|---|
| ID | 6968076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 4908595 |
|---|
| End bp | 4909617 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643388930 |
|---|
| Product | lysophospholipase L2 |
|---|
| Protein accession | YP_002273344 |
|---|
| Protein GI | 209398086 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.308584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCAGC AGCAAAAAGA CTGGGAAACA AGAGAAAACG CGTTTGCTGC TTTTACCATG
GGACCGCTGA CTGATTTCTG GCGTCAGCGT GATGAAGCAG AGTTTACTGG TGTGGATGAC
ATTCCGGTGC GCTTTGTCCG TTTTCGCGCA CAGCACCATG ACCGGGTGGT AGTCATCTGC
CCGGGGCGTA TTGAGAGTTA CGTAAAATAT GCGGAACTGG CCTACGATTT GTTCCATTTG
GGGTTTGATG TCTTAATCAT CGACCATCGC GGGCAGGGAC GTTCCGGTCG CCTGTTAGCC
GATCCGCATC TCGGGCATGT TAATCGCTTT AATGATTATG TTGATGATCT GGCGGCATTC
TGGCAACAGG AGGTCCAGCC CGGTCCGTGG CGTAAACGCT ATATACTGGC ACATTCGATG
GGCGGTGCGA TCTCCACATT ATTTCTGCAA CGCCATCCAG GTGTATGTGA CGCCATTGCG
CTAACTGCGC CAATGTTTGG GATCGTGATT CGTATGCCGT CATTTATGGC ACGGCAGATC
CTCAACTGGG CCGAAGCGCA TCCACGTTTC CGTGATGGCT ATGCAATAGG CACCGGGCGC
TGGCGCGCGT TGCCGTTTGC TATCAACGTA CTGACCCACA GCAGACAGCG ATATCGACGT
AACTTACGCT TCTATGCTGA TGACCCAACG ATTCGCGTCG GTGGGCCGAC CTACCATTGG
GTACGCGAAA GTATTCTGGC TGGCGAACAG GTGTTAGCCG GTGCGGGTGA TGACGCCACG
CCAACGCTTC TCTTGCAGGC TGAAGAGGAA CGCGTGGTGG ATAACCGCAT TCATGACCGT
TTTTGTGAAC TCCGCACCGC CGCGGGCCAT CCTGTCGAAG GGGGACGACC GCTGGTAATT
AAAGGTGCGT ACCATGAGAT CCTTTTTGAA AAGGACGCAA TGCGCTCAGT TGCGCTCCAC
GCCATCGTTG ATTTTTTCAA CAGGCATAAC TCACCCAGCG GAAACCGCTC TACAGAGGTT
TAA
|
|---|
| Protein sequence | MFQQQKDWET RENAFAAFTM GPLTDFWRQR DEAEFTGVDD IPVRFVRFRA QHHDRVVVIC
PGRIESYVKY AELAYDLFHL GFDVLIIDHR GQGRSGRLLA DPHLGHVNRF NDYVDDLAAF
WQQEVQPGPW RKRYILAHSM GGAISTLFLQ RHPGVCDAIA LTAPMFGIVI RMPSFMARQI
LNWAEAHPRF RDGYAIGTGR WRALPFAINV LTHSRQRYRR NLRFYADDPT IRVGGPTYHW
VRESILAGEQ VLAGAGDDAT PTLLLQAEEE RVVDNRIHDR FCELRTAAGH PVEGGRPLVI
KGAYHEILFE KDAMRSVALH AIVDFFNRHN SPSGNRSTEV
|
|---|
| |