| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5243 |
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| Symbol | hemC |
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| ID | 6971305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4886598 |
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| End bp | 4887554 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643388907 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_002273321 |
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| Protein GI | 209396873 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTAA CAAGCATGTT AGACAATGTT TTAAGAATTG CCACACGCCA AAGCCCACTT
GCACTCTGGC AGGCACACTA TGTCAAAGAC AAGTTGATGG CGAGCCATCC GGGCCTGGTC
GTTGAACTGG TACCGATGGT GACGCGCGGC GATGTGATTC TTGATACGCC GCTGGCGAAA
GTCGGCGGAA AAGGCTTATT TGTAAAAGAG CTGGAAGTCG CGCTCCTCGA AAATCGCGCC
GATATCGCCG TACATTCAAT GAAAGATGTG CCGGTTGAAT TCCCGCAAGG TCTGGGCCTG
GTCACTATTT GTGAGCGTGA AGATCCTCGC GATGCCTTTG TGTCCAATAA CTATGACAGT
CTGGATGCGT TACCGGCAGG CAGTATCGTC GGGACGTCCA GTTTACGTCG CCAGTGCCAA
CTGGCTGAAC GCCGCCCGGA TCTGATTATC CGCTCCCTGC GCGGCAACGT CGGCACTCGC
CTGAGCAAAC TGGATAACGG CGAATACGAT GCCATCATTC TTGCCGTAGC CGGACTAAAA
CGTTTAGGTC TGGAGTCCCG CATTCGCGCC GCGTTGCCAC CCGAGATTTC TCTTCCGGCG
GTAGGACAAG GTGCAGTCGG TATTGAATGC CGCCTTGATG ATACACGCAC TCGCGAGCTG
CTTGCCGCGC TGAATCACCA CGAAACTGCA CTGCGCGTTA CCGCAGAACG CGCCATGAAT
ACCCGTCTCG AAGGTGGATG TCAGGTGCCA ATTGGTAGCT ACGCCGAGCT TATTGATGGC
GAAATCTGGC TGCGTGCGCT GGTCGGCGCG CCGGACGGTT CGCAGATTAT TCGCGGTGAA
CGCCGCGGTG CGCCGCAAGA TGCCGAACAA ATGGGGATTT CGCTGGCAGA AGAGCTACTG
AATAACGGCG CGCGCGAGAT CCTCGCTGAA GTCTATAACG GAGACGCCCC GGCATGA
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| Protein sequence | MTVTSMLDNV LRIATRQSPL ALWQAHYVKD KLMASHPGLV VELVPMVTRG DVILDTPLAK
VGGKGLFVKE LEVALLENRA DIAVHSMKDV PVEFPQGLGL VTICEREDPR DAFVSNNYDS
LDALPAGSIV GTSSLRRQCQ LAERRPDLII RSLRGNVGTR LSKLDNGEYD AIILAVAGLK
RLGLESRIRA ALPPEISLPA VGQGAVGIEC RLDDTRTREL LAALNHHETA LRVTAERAMN
TRLEGGCQVP IGSYAELIDG EIWLRALVGA PDGSQIIRGE RRGAPQDAEQ MGISLAEELL
NNGAREILAE VYNGDAPA
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