Gene ECH74115_5205 details

Gene Information

• Locus tag: ECH74115_5205
• Symbol: ilvD
• ID: 6967710
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli O157:H7 str. EC4115
• Kingdom: Bacteria
• Replicon accession: NC_011353
• Strand: +
• Start bp: 4850020
• End bp: 4851870
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643388870
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_002273290
• Protein GI: 209397588
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 65
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCTAAGT ACCGTTCCGC CACCACCACT CATGGTCGTA ATATGGCGGG TGCTCGTGCG 
CTGTGGCGCG CCACCGGAAT GACCGACGCC GATTTCGGTA AGCCGATTAT CGCGGTTGTG 
AACTCGTTCA CCCAATTTGT ACCGGGTCAC GTCCATCTGC GCGATCTCGG TAAACTGGTC 
GCCGAACAAA TTGAAGCGGC TGGCGGCGTT GCCAAAGAGT TCAACACCAT TGCGGTGGAT 
GATGGGATTG CCATGGGCCA CGGGGGGATG CTTTATTCAC TGCCATCTCG CGAACTGATC 
GCTGATTCCG TTGAGTATAT GGTCAACGCC CACTGCGCCG ACGCCATGGT CTGCATCTCT 
AACTGTGACA AAATCACCCC GGGGATGCTG ATGGCTTCCC TGCGTCTGAA TATTCCGGTG 
ATCTTTGTTT CCGGCGGCCC GATGGAGGCC GGGAAAACCA AACTGTCCGA TCAGATCATC 
AAGCTCGATC TGGTTGATGC GATGATCCAG GGCGCAGACC CGAAAGTATC TGACTCCCAG 
AGCGATCAGG TTGAACGTTC CGCATGCCCA ACCTGCGGTT CCTGCTCCGG GATGTTTACC 
GCTAACTCAA TGAACTGCCT GACCGAAGCG CTGGGTCTGT CGCAGCCGGG CAACGGCTCG 
CTGCTGGCAA CCCACTCTGA CCGTAAGCAG CTGTTCCTCA ATGCTGGTAA ACGCATTGTT 
GAATTGACCA AACGTTACTA CGAGCAAAAC GACGAAAGTG CACTGCCCCG CAATATTGCT 
AGCAAAGCGG CGTTTGAAAA TGCCATGACG CTGGATATCG CGATGGGTGG ATCGACTAAC 
ACCGTACTTC ACCTGCTGGC GGCGGCGCAG GAAGCGGAAA TCGACTTCAC CATGAGTGAT 
ATCGATAAGC TTTCCCGCAA GGTTCCGCAG TTATGCAAAG TCGCGCCGAG CACCCAAAAA 
TACCATATGG AAGATGTTCA CCGTGCTGGT GGTGTTATCG GTATTCTCGG CGAGCTGGAT 
CGTGCGGGGT TACTGAACCG TGATGTGAAA AACGTACTTG GCCTGACGTT GCCGCAAACG 
CTGGAACAAT ACGACGTTAT GCTGACCCAG GATGACGCGG TAAAAAATAT GTTCCGCGCC 
GGCCCTGCGG GTATCCGTAC CACCCAGGCA TTCTCGCAAG ATTGCCGTTG GGATACGCTG 
GACGACGATC GCGCCAATGG CTGTATCCGC TCGCTGGAAC ACGCCTATAG CAAAGACGGC 
GGCCTGGCGG TGCTCTACGG TAATTTCGCG GAAAACGGCT GCATCGTTAA AACTGCGGGC 
GTCGATGACA GCATCCTCAA ATTCACCGGC CCGGCGAAAG TGTACGAAAG CCAGGACGAC 
GCGGTAGAAG CGATTCTCGG CGGTAAAGTT GTCGCCGGAG ATGTGGTAGT AATTCGCTAT 
GAAGGCCCAA AAGGTGGTCC GGGGATGCAG GAAATGCTCT ACCCAACCAG CTTCCTGAAA 
TCAATGGGGC TCGGTAAAGC CTGTGCGCTG ATCACCGACG GTCGTTTCTC TGGCGGCACC 
TCTGGCCTTT CTATCGGCCA CGTCTCACCG GAAGCGGCAA GCGGCGGCAG CATTGGCCTG 
ATTGAAGACG GCGACCTGAT CGCCATCGAC ATTCCGAACC GTGGCATTCA GTTACAGGTA 
AGCGATGCCG AACTGGCGGC GCGTCGTGAA GCGCAGGAAG CTCGGGGTGA CAAAGCCTGG 
ACGCCGAAAA ATCGTGAACG TCAGATCTCC TTTGCCCTGC GTGCTTATGC CAGCCTGGCA 
ACCAGCGCCG ACAAAGGCGC GGTGCGCGAT AAATCGAAAC TGGGGGGTTA A 

 

Protein sequence

MPKYRSATTT HGRNMAGARA LWRATGMTDA DFGKPIIAVV NSFTQFVPGH VHLRDLGKLV 
AEQIEAAGGV AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS 
NCDKITPGML MASLRLNIPV IFVSGGPMEA GKTKLSDQII KLDLVDAMIQ GADPKVSDSQ 
SDQVERSACP TCGSCSGMFT ANSMNCLTEA LGLSQPGNGS LLATHSDRKQ LFLNAGKRIV 
ELTKRYYEQN DESALPRNIA SKAAFENAMT LDIAMGGSTN TVLHLLAAAQ EAEIDFTMSD 
IDKLSRKVPQ LCKVAPSTQK YHMEDVHRAG GVIGILGELD RAGLLNRDVK NVLGLTLPQT 
LEQYDVMLTQ DDAVKNMFRA GPAGIRTTQA FSQDCRWDTL DDDRANGCIR SLEHAYSKDG 
GLAVLYGNFA ENGCIVKTAG VDDSILKFTG PAKVYESQDD AVEAILGGKV VAGDVVVIRY 
EGPKGGPGMQ EMLYPTSFLK SMGLGKACAL ITDGRFSGGT SGLSIGHVSP EAASGGSIGL 
IEDGDLIAID IPNRGIQLQV SDAELAARRE AQEARGDKAW TPKNRERQIS FALRAYASLA 
TSADKGAVRD KSKLGG