Gene ECH74115_5186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5186 
SymbolrbsC 
ID6971397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4831827 
End bp4832792 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content53% 
IMG OID643388852 
Productribose ABC transporter permease protein 
Protein accessionYP_002273278 
Protein GI209396828 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0679383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCC AGACTGTCTC TGGTCGCCGT TATTTCACGA AAGCGTGGCT GATGGAGCAG 
AAATCGCTTA TCGCTCTGCT GGTGCTGATC GCGATTGTCT CGACGTTAAG CCCGAACTTT
TTCACCATCA ATAACTTATT CAATATTCTC CAGCAAACCT CAGTGAACGC CATTATGGCG
GTCGGGATGA CGCTGGTGAT CCTGACGTCG GGCATCGACT TGTCGGTAGG TTCTCTGTTG
GCGCTAACCG GCGCAGTTGC TGCATCTATC GTCGGCATTG AAGTCAATGC GCTGGTGGCT
GTCGCTGCCG CTCTCGCGTT AGGTGCCGCA ATTGGTGCGG TAACCGGAGT GATTGTAGCG
AAAGGTCGCG TCCAGGCGTT TATCGCTACG CTGGTTATGA TGCTTTTACT GCGCGGCGTG
ACCATGGTTT ATACCAACGG TAGCCCAGTG AATACCGGCT TTACTGAGAA CGCCGATCTG
TTTGGCTGGT TTGGTATTGG TCGTCCGCTG GGCGTACCGA CGCCAGTCTG GATCATGGGG
ATTGTCTTCC TCGCGGCCTG GTACATGCTG CATCACACGC GTCTGGGGCG TTACATCTAC
GCGCTGGGCG GCAACGAAGC GGCAACGCGT CTTTCTGGTA TCAACGTCAA TAAAATCAAA
ATCATCGTCT ATTCTCTTTG TGGTCTGCTG GCATCACTGG CCGGGATCAT TGAAGTGGCG
CGTCTCTCCT CCGCACAACC CACGGCGGGG ACTGGCTATG AGCTGGATGC TATTGCTGCG
GTGGTTCTGG GCGGTACGAG TCTGGCGGGC GGAAAAGGTC GCATTGTTGG GACGTTGATC
GGCGCATTAA TTCTTGGCTT CCTTAATAAT GGATTGAATT TGTTAGGTGT TTCCTCCTAT
TACCAGATGA TCGTCAAAGC GGTGGTGATT TTGCTGGCGG TGCTGGTAGA CAACAAAAAG
CAGTAA
 
Protein sequence
MTTQTVSGRR YFTKAWLMEQ KSLIALLVLI AIVSTLSPNF FTINNLFNIL QQTSVNAIMA 
VGMTLVILTS GIDLSVGSLL ALTGAVAASI VGIEVNALVA VAAALALGAA IGAVTGVIVA
KGRVQAFIAT LVMMLLLRGV TMVYTNGSPV NTGFTENADL FGWFGIGRPL GVPTPVWIMG
IVFLAAWYML HHTRLGRYIY ALGGNEAATR LSGINVNKIK IIVYSLCGLL ASLAGIIEVA
RLSSAQPTAG TGYELDAIAA VVLGGTSLAG GKGRIVGTLI GALILGFLNN GLNLLGVSSY
YQMIVKAVVI LLAVLVDNKK Q