Gene ECH74115_5130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5130 
SymboldnaA 
ID6971639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4771663 
End bp4773066 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content54% 
IMG OID643388802 
Productchromosomal replication initiation protein 
Protein accessionYP_002273228 
Protein GI209395729 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.58594e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0494414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACTTT CGCTTTGGCA GCAGTGTCTT GCCCGATTGC AGGATGAGTT ACCAGCCACA 
GAATTCAGTA TGTGGATACG CCCATTGCAG GCGGAACTGA GCGATAACAC GCTGGCCCTG
TACGCGCCAA ACCGTTTTGT CCTCGATTGG GTACGGGACA AGTACCTTAA TAATATCAAT
GGACTGCTAA CCAGTTTCTG CGGAGCGGAT GCCCCACAGC TGCGTTTTGA AGTCGGCACC
AAATCGGTGA CGCAAACGCC ACAAGCGGCA GTGACGAGCA ACGTCGCGGC CCCTGCACAG
GTGGCGCAAA CGCAGCCGCA ACGTGCTGCG CCTTCTACGC GCTCAGGTTG GGATAACGTC
CCGGCCCCGG CAGAACCGAC CTATCGTTCT AACGTAAACG TCAAACACAC GTTTGATAAC
TTCGTTGAAG GTAAATCTAA CCAACTGGCG CGCGCGGCGG CTCGCCAGGT GGCAGATAAC
CCTGGCGGTG CCTATAACCC GTTGTTCCTT TATGGCGGCA CGGGTCTGGG TAAAACTCAC
CTGCTGCATG CGGTGGGTAA CGGCATTATG GCGCGCAAGC CGAATGCCAA AGTGGTTTAT
ATGCACTCCG AGCGCTTTGT TCAGGACATG GTTAAAGCCC TGCAAAACAA CGCGATCGAA
GAGTTTAAAC GCTACTACCG TTCCGTAGAT GCACTGCTGA TCGACGATAT TCAGTTTTTT
GCTAATAAAG AACGATCTCA GGAAGAGTTT TTCCACACCT TCAACGCCCT GCTGGAAGGT
AATCAACAGA TCATTCTCAC CTCGGATCGC TATCCGAAAG AGATCAACGG CGTTGAGGAT
CGTTTGAAAT CCCGCTTCGG CTGGGGGCTG ACTGTGGCGA TCGAACCGCC AGAGTTAGAA
ACCCGCGTGG CGATCCTGAT GAAAAAGGCC GACGAAAATG ACATTCGTTT GCCAGGCGAA
GTGGCGTTCT TTATCGCCAA GCGTCTACGA TCTAACGTAC GTGAGCTGGA AGGCGCGCTG
AACCGCGTCA TTGCCAACGC CAACTTTACC GGACGGGCGA TCACTATCGA CTTCGTGCGT
GAGGCGCTGC GCGACTTGCT GGCATTGCAG GAAAAACTGG TCACCATCGA CAATATTCAG
AAGACGGTGG CGGAGTACTA CAAGATCAAA GTCGCGGATC TCCTTTCCAA GCGTCGATCC
CGCTCGGTGG CTCGTCCGCG TCAGATGGCG ATGGCGCTGG CGAAAGAGCT GACTAACCAC
AGTCTGCCAG AGATTGGCGA TGCGTTTGGT GGTCGTGACC ACACTACGGT GCTTCATGCC
TGCCGGAAGA TCGAGCAGCT GCGTGAAGAG AGCCACGATA TCAAAGAAGA TTTTTCAAAT
TTAATCAGAA CATTGTCATC GTAA
 
Protein sequence
MSLSLWQQCL ARLQDELPAT EFSMWIRPLQ AELSDNTLAL YAPNRFVLDW VRDKYLNNIN 
GLLTSFCGAD APQLRFEVGT KSVTQTPQAA VTSNVAAPAQ VAQTQPQRAA PSTRSGWDNV
PAPAEPTYRS NVNVKHTFDN FVEGKSNQLA RAAARQVADN PGGAYNPLFL YGGTGLGKTH
LLHAVGNGIM ARKPNAKVVY MHSERFVQDM VKALQNNAIE EFKRYYRSVD ALLIDDIQFF
ANKERSQEEF FHTFNALLEG NQQIILTSDR YPKEINGVED RLKSRFGWGL TVAIEPPELE
TRVAILMKKA DENDIRLPGE VAFFIAKRLR SNVRELEGAL NRVIANANFT GRAITIDFVR
EALRDLLALQ EKLVTIDNIQ KTVAEYYKIK VADLLSKRRS RSVARPRQMA MALAKELTNH
SLPEIGDAFG GRDHTTVLHA CRKIEQLREE SHDIKEDFSN LIRTLSS