Gene ECH74115_5129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5129 
SymboldnaN 
ID6968467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4770558 
End bp4771658 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content55% 
IMG OID643388801 
ProductDNA polymerase III subunit beta 
Protein accessionYP_002273227 
Protein GI209400437 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000402669 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.135624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA CCGTAGAACG TGAGCATTTA TTAAAACCGC TACAACAGGT GAGCGGTCCG 
TTAGGTGGTC GTCCTACGCT ACCGATTCTC GGTAATCTGC TGTTACAGGT TGCTGACGGT
ACGTTGTCGC TGACCGGTAC TGATCTCGAG ATGGAAATGG TGGCACGCGT TGCGCTGGTT
CAGCCACACG AGCCAGGAGC GACGACCGTT CCGGCGCGCA AATTCTTTGA TATCTGCCGT
GGTCTGCCTG AAGGCGCGGA AATTGCCGTG CAGCTGGAAG GTGAGCGGAT GCTGGTGCGC
TCCGGGCGTA GCCGTTTTTC GCTGTCTACC CTGCCAGCGG CGGATTTCCC GAACCTCGAT
GACTGGCAGA GTGAAGTCGA ATTTACCCTG CCGCAGGCGA CGATGAAGCG TCTGATTGAA
GCGACCCAGT TTTCTATGGC GCATCAGGAC GTTCGCTATT ACTTAAACGG TATGCTGTTT
GAAACCGAAG GTGAAGAACT GCGCACCGTA GCGACCGACG GCCACCGTCT GGCGGTCTGT
TCAATGCCAA TTGGTCAATC TTTGCCAAGC CATTCGGTGA TCGTGCCGCG TAAAGGCGTG
ATTGAACTGA TGCGTATGCT CGACGGCGGC GATAATCCGC TGCGTGTGCA GATTGGCAGC
AACAATATTC GCGCCCACGT TGGCGACTTT ATCTTCACCT CTAAACTGGT GGATGGTCGC
TTCCCGGATT ACCGCCGCGT TCTGCCGAAG AATCCGGACA AACATCTGGA AGCAGGCTGC
GATCTCCTCA AGCAGGCGTT TGCTCGCGCG GCAATTCTCT CTAACGAGAA ATTCCGCGGT
GTGCGCCTGT ATGTCAGCGA AAACCAGCTG AAAATCACCG CCAACAACCC GGAACAGGAA
GAAGCGGAAG AGATCCTCGA CGTTACCTAT AGCGGTGCGG AGATGGAAAT CGGCTTCAAC
GTCAGCTATG TGCTGGATGT TCTGAACGCG CTGAAATGCG AAAACGTCCG CATGATGCTG
ACCGATTCGG TTTCCAGCGT GCAGATTGAA GATGCAGCCA GCCAGAGCGC GGCTTATGTT
GTCATGCCAA TGAGACTGTA A
 
Protein sequence
MKFTVEREHL LKPLQQVSGP LGGRPTLPIL GNLLLQVADG TLSLTGTDLE MEMVARVALV 
QPHEPGATTV PARKFFDICR GLPEGAEIAV QLEGERMLVR SGRSRFSLST LPAADFPNLD
DWQSEVEFTL PQATMKRLIE ATQFSMAHQD VRYYLNGMLF ETEGEELRTV ATDGHRLAVC
SMPIGQSLPS HSVIVPRKGV IELMRMLDGG DNPLRVQIGS NNIRAHVGDF IFTSKLVDGR
FPDYRRVLPK NPDKHLEAGC DLLKQAFARA AILSNEKFRG VRLYVSENQL KITANNPEQE
EAEEILDVTY SGAEMEIGFN VSYVLDVLNA LKCENVRMML TDSVSSVQIE DAASQSAAYV
VMPMRL