Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5104 |
Symbol | ilvB |
ID | 6966647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4744675 |
End bp | 4746363 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643388776 |
Product | acetolactate synthase catalytic subunit |
Protein accession | YP_002273202 |
Protein GI | 209396868 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.127246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGTT CGGGCACATC ATCGACGCGT AAGCGCTTTA CCGGCGCAGA ATTTATCGTT CATTTCCTGG AACAGCAGGG CATTAAGATT GTGACGGGCA TTCCGGGCGG TTCTATCCTG CCTGTTTACG ATGCCTTAAG CCAAAGCACG CAAATCCGCC ATATTCTGGC TCGCCATGAA CAGGGCGCGG GGTTTATCGC TCAGGGAATG GCGCGCACCG ACGGTAAACC GGCGGTCTGT ATGGCCTGTA GCGGACCGGG GGCGACTAAC CTGGTGACCG CCATTGCTGA TGCGCGGCTG GACTCCATCC CGCTGATTTG CATCACTGGT CAGGTTCCCG CCTCAATGAT CGGCACTGAC GCCTTCCAGG AAGTCGACAC CTACGGCATC TCTATCCCCA TCACCAAACA CAACTATCTG GTCAGACATA TCGAAGAACT CCCGCAGGTC ATGAGCGATG CCTTCCGTAT TGCGCAATCA GGCCGCCCTG GCCCGGTGTG GATAGACATT CCTAAGGATG TGCAAACGGC CGTTTTTGAG ATTGAAGCAC AGCCCGCGGT GGCAGAAAAA GCCGTCGCGC CCGCCTTTAG CGAAGAAAGC ATTCGTGACG CAGCGGCAAT GATTAATGCT GCCAAACGCC CGGTGCTTTA TCTGGGCGGT GGTGTGATCA ATGCGCCTGC GAGAGTGCGT GAACTGGCGG AGAAAGCGCA GCTGCCTACC ACAATGACTT TAATGGCGCT GGGCATGTTG CCAAAAGCGC ATCCGTTGTC GCTGGGTATG TTGGGGATGC ACGGTGTGCG CAGCACCAAC TATATTTTGC AGGAGGCGGA TTTGTTGATT GTGCTCGGTG CGCGTTTTGA TGACCGGGCG ATTGGCAAAA CCGAGCAGTT CTGCCCGAAT GCCAAAATTA TTCATGTCGA TATCGACCGC GCAGAGCTGG GTAAAATCAA GCAGCCGCAC GTAGCGATTC AGGCGGATGT TGATGACGTG CTGGCGCAGC TGATCCCGCA GGTGGAAGCG CAACCGCGTG CAGAGTGGCA CCAGTTGGTA GCGGATTTGC AGCGCGAATT CCCGTGTCCA ATCCCGAAAG CGTGCGATCC GTTAAGCCAT TACGGCCTGA TCAACGCCGT TGCCGCCTGT GTCGATGACA ATGCGATTAT CACCACCGAT GTGGGTCAGC ATCAGATGTG GACGGCGCAG GCTTATCCGC TCAATCGCCC ACGCCAGTGG CTGACCTCCG GCGGGCTGGG CACGATGGGT TTTGGCCTGC CTGCGGCGAT TGGCGCGGCG CTGGCGAACC CGGATCGCAA AGTGTTGTGT TTCTCCGGCG ATGGCAGCCT GATGATGAAT ATTCAGGAGA TGGCGACCGC CAGCGAAAAC CAGCTGGATG TTAAAATCAT TCTGATGAAC AACGAAGCGC TGGGGCTGGT GCATCAGCAA CAGAGTCTGT TCTACAAGCA GGGCGTTTTT GCCGCTACCT ATCCGGGAAA AATCAACTTT ATGCAGATTG CCGCCGGATT CGGCCTCGAA ACCTGTGATT TGAATAACGA AGCCGATCCG CAGGCTGCAT TGCAGGAAAT CATCAATCGC CCTGGTCCGG CGCTGATCCA TGTGCGCATT GATGCCGAAG AAAAAGTGTA CCCGATGGTG CCGCCAGGTG CGGCGAATAC AGAAATGGTG GGGGAATAA
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Protein sequence | MASSGTSSTR KRFTGAEFIV HFLEQQGIKI VTGIPGGSIL PVYDALSQST QIRHILARHE QGAGFIAQGM ARTDGKPAVC MACSGPGATN LVTAIADARL DSIPLICITG QVPASMIGTD AFQEVDTYGI SIPITKHNYL VRHIEELPQV MSDAFRIAQS GRPGPVWIDI PKDVQTAVFE IEAQPAVAEK AVAPAFSEES IRDAAAMINA AKRPVLYLGG GVINAPARVR ELAEKAQLPT TMTLMALGML PKAHPLSLGM LGMHGVRSTN YILQEADLLI VLGARFDDRA IGKTEQFCPN AKIIHVDIDR AELGKIKQPH VAIQADVDDV LAQLIPQVEA QPRAEWHQLV ADLQREFPCP IPKACDPLSH YGLINAVAAC VDDNAIITTD VGQHQMWTAQ AYPLNRPRQW LTSGGLGTMG FGLPAAIGAA LANPDRKVLC FSGDGSLMMN IQEMATASEN QLDVKIILMN NEALGLVHQQ QSLFYKQGVF AATYPGKINF MQIAAGFGLE TCDLNNEADP QAALQEIINR PGPALIHVRI DAEEKVYPMV PPGAANTEMV GE
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