| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5073 |
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| Symbol | epaR |
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| ID | 6969015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4719391 |
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| End bp | 4720167 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 643388751 |
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| Product | type III secretion apparatus protein SpaR/YscT/HrcT |
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| Protein accession | YP_002273177 |
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| Protein GI | 209399341 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.908743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.0268532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGAGA TAATGACGGT CATAGTATCA TCATTTTATT GTATACTCAG GCCGCTGGGG
ATGTTTATTA TCCTACCAAT ATTTTCAACA GGTGTTTTAC TCAGTAACTT TATTCGCAAC
TCAATTATGA TTGCGTTTAC GCTTCCGATC ATAGTAGAGA ACTATACATT TTCGGAAAAA
TTGCCATCTG GAATCTTTCA GTTGACAGGA ATAGCGCTAA AAGAAATAAG TATTGGTTTT
TTCATTGGGT TATCATTTAC TATTCTTTTT TGGGCAATAG ATGCGGCTGG ACAGATTATT
GATACTCTAA GAGGCTCAAC AATATCTTCA ATTTTTAACC CGTCCATAAG TGATTCATCT
TCTATCACTG GCGTTATCTT GTACCAATTT ATCTCTGTGA TCTTTGTTAT TCATGGTGGG
ATACAAAGCA TCCTAGATAA GCTATATTTA TCCTACGAGA TATTACCATT ACAAGCCGAT
ATTGCATTCA ATCGTGCTTT AATAGATTTT TTGTTTTCTC TATGGGATTC ATTTATTAAA
CTGATGTTAT CATTTTCAGT TCCCATGATT ATCGGTATAT TCTTATGTGA TATGGGGTTT
GGGTTTCTTA ACAAAACAGC ACCTCAGCTA AACGTATTCA CATTATCACT GCCAGTAAAA
AGTTTGATAG CAATCTTTAT ATTGCTATTA GTTATTCATG TTTTTCCTGA TTTTATTACG
GCAAATATTC ATTCTGACAT AATTGATAGA TCGTTACCGA GCATGATTAA TGAGTGA
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| Protein sequence | MNEIMTVIVS SFYCILRPLG MFIILPIFST GVLLSNFIRN SIMIAFTLPI IVENYTFSEK
LPSGIFQLTG IALKEISIGF FIGLSFTILF WAIDAAGQII DTLRGSTISS IFNPSISDSS
SITGVILYQF ISVIFVIHGG IQSILDKLYL SYEILPLQAD IAFNRALIDF LFSLWDSFIK
LMLSFSVPMI IGIFLCDMGF GFLNKTAPQL NVFTLSLPVK SLIAIFILLL VIHVFPDFIT
ANIHSDIIDR SLPSMINE
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