| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5071 |
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| Symbol | |
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| ID | 6969853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4718361 |
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| End bp | 4719398 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643388750 |
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| Product | secretion system apparatus protein SsaU |
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| Protein accession | YP_002273176 |
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| Protein GI | 209398003 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4792] Type III secretory pathway, component EscU |
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| TIGRFAM ID | [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.796147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.0581283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGAAA AAACAGAAAA GCCCACACCC AAAAAACTAA GGGATCTAAA AAAGAAGGGC
GATGTAACAA AAAGTGAAGA GGTAATGGCT GCAGTGCAGT CATTAATCTT ATTTTCATTT
TTTTCTTTAT ATGGCATGAG TTTTTTTGTT GATATAGTTG GATTAGTTAA TACGACAATA
GACTCGCTAA ATAGACCGTT TTTGTATGCC ATTCGAGAAA TATTAGGTGC GGTATTAAAT
ATATTTTTAT TATATATTTT GCCAATTTCT TTGATTGTCT TTGTTGGAAC TGTTACGACT
GGTGTATCAC AAATAGGATT CATCTTTGCG GTTGAAAAAA TAAAACCATC GGCTCAGAAG
ATTAGTGTAA AAAATAACCT GAAAAATATT TTTTCTGTAA AGAGCATTTT TGAGCTACTT
AAATCAGTAT TTAAGTTAGT GATAATTGTT CTCATTTTTT ATTTTATGGG GCATTCATAT
GCAAATGAGT TTGCTAATTT CACAGGACTG AACGCATATC AAGCTCTTGT CGTTGTTGCC
TTTTTTGTTT TTCTTTTATG GAAAGGCGTG CTATTCGGAT ATCTACTCTT TTCAGTATTT
GATTTCTGGT TCCAGAAGCA TGAGGGACTG AAGAAAATGA AAATGAGTAA AGATGAGGTG
AAACGAGAAG CCAAGGATAC TGATGGTAAC CCTGAAATTA AAGGGGAGCG CCGTCGCCTT
CATTCCGAGA TACAAAGTGG AAGTTTGGCT AATAACATCA AAAAATCAAC CGTTATTGTT
AAAAACCCGA CTCACATTGC GATTTGCCTA TACTATAAAC TTGGGGAGAC TCCATTACCT
TTAGTTATTG AAACAGGAAA AGATGCCAAA GCTCTACAGA TCATTAAACT GGCTGAACTC
TATGATATTC CAGTGATTGA AGATATTCCT TTAGCAAGAA CTCTCTATAA GAATATACAT
AAAGGACAAT ATATAACAGA AGACTTTTTT GAACCTGTGG CACAATTGAT TCGTATTGCG
ATAGACCTTG ATTATTAA
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| Protein sequence | MSEKTEKPTP KKLRDLKKKG DVTKSEEVMA AVQSLILFSF FSLYGMSFFV DIVGLVNTTI
DSLNRPFLYA IREILGAVLN IFLLYILPIS LIVFVGTVTT GVSQIGFIFA VEKIKPSAQK
ISVKNNLKNI FSVKSIFELL KSVFKLVIIV LIFYFMGHSY ANEFANFTGL NAYQALVVVA
FFVFLLWKGV LFGYLLFSVF DFWFQKHEGL KKMKMSKDEV KREAKDTDGN PEIKGERRRL
HSEIQSGSLA NNIKKSTVIV KNPTHIAICL YYKLGETPLP LVIETGKDAK ALQIIKLAEL
YDIPVIEDIP LARTLYKNIH KGQYITEDFF EPVAQLIRIA IDLDY
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