Gene ECH74115_5028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5028 
Symbol 
ID6966657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4678108 
End bp4679817 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content54% 
IMG OID643388709 
ProductAsmA family protein 
Protein accessionYP_002273136 
Protein GI209396213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA TTGGGAAGCT GCTTCTCTAC ATTCTCATCG CTCTGTTAGT GGTGATCGCT 
GGCCTCTATT TTCTTCTGCA AACCCGCTGG GGAGCAGAAC ATATCAGCGC ATGGGTTTCC
GAGAATAGCG ACTATCATCT GGCCTTCGGG GCGATGGATC ACCGTTTTTC CGCGCCATCT
CATATCGTGC TGGAGAACGT CACGTTTGGT CGTGATGGTC AGCCCGCGAC CCTGGTGGCA
AAAAGTGTCG ACATTGCGCT AAGCAGTCGG CAACTGACCG AACCACGCCA TGTCGATACC
ATCCTGCTGG AAAACGGGAC GCTGAATCTC ACCGACCAGA CCGCGCCGCT ACCGTTCAAA
GCCGATCGTC TGCAACTGCG TGATATGGCG TTTAATAGCC CGAATAGCGA ATGGAAACTG
AGCGCGCAGC GGGTAAATGG CGGCGTGGTT CCGTGGTCAC CAGAAGCCGG TAAAGTGCTG
GGTACGAAGG CGCAGATTCA GTTTAGTGCC GGATCGCTTT CGCTCAATGA TGTTCCTGCC
ACCAATGTAC TGATTGAAGG CAGTATTGAT AACGATCGCG TTACGCTGAC TAACCTGGGT
GCCGACATCG CCCGCGGGAC ATTAACCGGA AACGCGCAGC GTAACGCCGA CGGCAGCTGG
CAAGTGGAAA ATCTGCGCAT GGCGGATATC CGTCTACAAA GCGAAAAATC GCTAACCGAC
TTCTTTGCGC CATTACGCTC TGTCCCGTCG TTGCAGATTG GTCGCCTGGA AGTGATCGAT
GCTCGTTTGC AAGGTCCGGA CTGGGCGGTG ACCGACCTCG ATCTCAGCTT GCGCAACATG
ACCTTCAGTA AAGATGACTG GCAGACACAA GAAGGCAAAC TGTCGATGAA CGCTAGCGAG
TTCATTTATG GTTCGCTGCA TTTATTTGAC CCGATTATAA ACGCGGAATT TTCCCCGCAG
GGCGTAGCGC TGCGCCAGTT CACCAGCCGC TGGGAAGGGG GTATGGTCAG AACGTCAGGG
AACTGGCTGC GTGACGGGAA AACGTTGATC CTTGATGATG CGGCAATTGC CGGGCTGGAA
TATACCTTGC CGAAAAACTG GCAACAGTTG TGGATGGAAA CGACACCCGG TTGGTTAAAC
AGCCTGCAAC TGAAGAGATT TAGCGCCAGC CGCAATCTGA TCATTGATAT CGACCCTGAC
TTCCCGTGGC AGCTCACCAC GCTCGATGGT TACGGTGCCA ACCTGACGCT GGTTACCGAT
CATAAATGGG GCGTCTGGAG TGGCTCGGCG AATCTGAATG CCGCCGCCGC GACATTCAAT
CGTGTTGATG TTCGTCGCCC GTCGCTGGCG CTGACCGCCA ACAGCAGCAC GGTGAATATC
AGCGAACTGA GTGCATTTAC TGAAAAAGGC ATTCTGGAAG CCACTGCCAG TGTTTCACAA
ACGCCACAAC GTCAGACCCA TATCAGCCTG AATGGACGCG GTGTGCCGGT GAATATTTTG
CAACAATGGG GATGGCCTGA ATTACCGTTG ACTGGCGACG GCAATATTCA GCTTACCGCC
AGTGGCGATA TTCAGGCCAA TGTCCCGCTG AAACCTACGG TTAGCGGGCA ACTCCATGCC
GTGAACGCCG CAAAGCAGCA AGTGACTCAA ACCATGAATG CGGGCGTCGT TTCCAGTAGC
GAAGTTACAT CGACAGAGCC GGTGCAGTAA
 
Protein sequence
MKFIGKLLLY ILIALLVVIA GLYFLLQTRW GAEHISAWVS ENSDYHLAFG AMDHRFSAPS 
HIVLENVTFG RDGQPATLVA KSVDIALSSR QLTEPRHVDT ILLENGTLNL TDQTAPLPFK
ADRLQLRDMA FNSPNSEWKL SAQRVNGGVV PWSPEAGKVL GTKAQIQFSA GSLSLNDVPA
TNVLIEGSID NDRVTLTNLG ADIARGTLTG NAQRNADGSW QVENLRMADI RLQSEKSLTD
FFAPLRSVPS LQIGRLEVID ARLQGPDWAV TDLDLSLRNM TFSKDDWQTQ EGKLSMNASE
FIYGSLHLFD PIINAEFSPQ GVALRQFTSR WEGGMVRTSG NWLRDGKTLI LDDAAIAGLE
YTLPKNWQQL WMETTPGWLN SLQLKRFSAS RNLIIDIDPD FPWQLTTLDG YGANLTLVTD
HKWGVWSGSA NLNAAAATFN RVDVRRPSLA LTANSSTVNI SELSAFTEKG ILEATASVSQ
TPQRQTHISL NGRGVPVNIL QQWGWPELPL TGDGNIQLTA SGDIQANVPL KPTVSGQLHA
VNAAKQQVTQ TMNAGVVSSS EVTSTEPVQ