Gene ECH74115_5022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5022 
SymbolspoT 
ID6971216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4669366 
End bp4671474 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content54% 
IMG OID643388703 
Productbifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 
Protein accessionYP_002273130 
Protein GI209400963 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTATCTGT TTGAAAGCCT GAATCAACTG ATTCAAACCT ACCTGCCGGA AGACCAAATC 
AAGCGTCTGC GGCAGGCGTA TCTCGTTGCA CGTGATGCTC ACGAGGGGCA AACACGTTCA
AGCGGTGAAC CCTATATCAC GCACCCGGTA GCGGTTGCCT GCATTCTGGC CGAGATGAAA
CTCGACTATG AAACGCTGAT GGCGGCGCTG CTGCATGACG TGATTGAAGA TACTCCCGCC
ACCTACCAGG ATATGGAACA GCTTTTTGGT AAAAGCGTCG CCGAGCTGGT AGAGGGGGTG
TCGAAACTTG ATAAACTCAA GTTCCGCGAT AAGAAAGAGG CGCAGGCCGA AAACTTTCGC
AAGATGATTA TGGCGATGGT GCAGGATATC CGCGTCATCC TCATCAAACT TGCCGACCGT
ACCCACAACA TGCGCACGCT GGGCTCACTT CGCCCGGACA AACGTCGCCG CATCGCCCGT
GAAACTCTCG AAATTTACAG CCCGCTGGCG CACCGTTTAG GTATCCACCA CATTAAAACC
GAACTCGAAG AGCTGGGTTT TGAGGCGCTG TATCCCAACC GTTATCGCGT AATCAAAGAA
GTGGTGAAAG CCGCGCGCGG CAACCGTAAA GAGATGATCC AGAAGATTCT TTCTGAAATC
GAAGGGCGTT TGCAGGAAGC GGGAATACCG TGCCGCGTCA GTGGTCGCGA AAAGCATCTT
TATTCGATTT ACTGTAAAAT GGTGCTCAAA GAGCAGCGTT TTCACTCAAT CATGGACATC
TACGCTTTCC GCGTGATCGT CAATGATTCT GACACCTGTT ATCGCGTGCT GGGCCAGATG
CACAGCCTGT ACAAGCCGCG TCCGGGCCGC GTGAAAGACT ATATCGCCAT TCCAAAAGCG
AACGGCTATC AGTCGTTGCA CACCTCGATG ATTGGCCCGC ACGGCGTGCC GGTTGAGGTC
CAGATCCGTA CCGAAGATAT GGATCAGATG GCGGAGATGG GTGTTGCCGC GCACTGGGCT
TATAAAGAGC ACGGCGAAAC CAGTACTACC GCACAAATCC GCGCCCAGCG CTGGATGCAA
AGCCTGCTGG AGCTGCAACA GAGCGCCGGT AGTTCGTTTG AATTTATCGA GAGCGTTAAA
TCCGATCTCT TCCCGGATGA GATTTACGTT TTCACACCGG AAGGGCGCAT TGTCGAGCTG
CCTGCCGGTG CAACGCCCGT CGACTTCGCT TATGCAGTGC ATACCGATAT CGGCCATGCC
TGCGTGGGCG CACGCGTCGA CCGCCAGCCT TACCCGCTGT CGCAGCCGCT TACTAGCGGT
CAGACCGTTG AAATCATTAC CGCTCCGGGC GCTCGCCCGA ATGCCGCTTG GCTGAACTTT
GTCGTTAGCT CGAAAGCGCG CGCCAAAATT CGTCAGTTGC TGAAAAACCT CAAGCGTGAT
GATTCTGTAA GCCTGGGCCG TCGTCTGCTC AACCATGCTT TGGGTGGTAG CCGTAAGCTC
AATGAAATCC CGCAGGAAAA TATTCAGCGC GAGCTGGATC GCATGAAGCT GGCAACGCTT
GACGATCTGC TGGCAGAAAT CGGCCTTGGT AACGCAATGA GCGTGGTGGT CGCGAAAAAT
CTACAACATG GGGACGCCTC CATTCCACCG GCGACTCAAA GCCACGGGCA TCTGCCGATC
AAAGGCGCTG ATGGCGTGCT GATCACCTTT GCGAAATGCT GCCGCCCCAT TCCTGGCGAC
CCGATTATCG CCCACGTCAG CCCCGGTAAA GGTCTGGTGA TCCACCATGA ATCCTGCCGT
AACATCCGTG GCTACCAGAA AGAGCCAGAG AAGTTTATGG CTGTGGAATG GGATAAAGAG
ACGGCGCAGG AGTTCATCAC CGAAATCAAG GTGGAGATGT TCAATCATCA GGGTGCGCTG
GCAAACCTGA CGGCGGCAAT TAACACCACG ACCTCGAATA TTCAAAGTTT GAATACGGAA
GAGAAAGATG GTCGCGTCTA CAGCGCCTTT ATTCGTCTGA CCGCTCGTGA CCGTGTGCAT
CTGGCGAATA TCATGCGCAA AATCCGCGTG ATGCCAGACG TGATTAAAGT CACCCGAAAC
CGAAATTAA
 
Protein sequence
MYLFESLNQL IQTYLPEDQI KRLRQAYLVA RDAHEGQTRS SGEPYITHPV AVACILAEMK 
LDYETLMAAL LHDVIEDTPA TYQDMEQLFG KSVAELVEGV SKLDKLKFRD KKEAQAENFR
KMIMAMVQDI RVILIKLADR THNMRTLGSL RPDKRRRIAR ETLEIYSPLA HRLGIHHIKT
ELEELGFEAL YPNRYRVIKE VVKAARGNRK EMIQKILSEI EGRLQEAGIP CRVSGREKHL
YSIYCKMVLK EQRFHSIMDI YAFRVIVNDS DTCYRVLGQM HSLYKPRPGR VKDYIAIPKA
NGYQSLHTSM IGPHGVPVEV QIRTEDMDQM AEMGVAAHWA YKEHGETSTT AQIRAQRWMQ
SLLELQQSAG SSFEFIESVK SDLFPDEIYV FTPEGRIVEL PAGATPVDFA YAVHTDIGHA
CVGARVDRQP YPLSQPLTSG QTVEIITAPG ARPNAAWLNF VVSSKARAKI RQLLKNLKRD
DSVSLGRRLL NHALGGSRKL NEIPQENIQR ELDRMKLATL DDLLAEIGLG NAMSVVVAKN
LQHGDASIPP ATQSHGHLPI KGADGVLITF AKCCRPIPGD PIIAHVSPGK GLVIHHESCR
NIRGYQKEPE KFMAVEWDKE TAQEFITEIK VEMFNHQGAL ANLTAAINTT TSNIQSLNTE
EKDGRVYSAF IRLTARDRVH LANIMRKIRV MPDVIKVTRN RN