| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5017 |
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| Symbol | ligB |
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| ID | 6969435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4666454 |
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| End bp | 4668187 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643388699 |
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| Product | NAD-dependent DNA ligase LigB |
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| Protein accession | YP_002273126 |
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| Protein GI | 209397991 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTTCAC CACGTTGTAT ATCTGCCAGC CTGACTACAG CGGAGGTGAA GATGAAAGTA
TGGATGGCGA TATTAATAAG TATCTTGTGC TGGCAATCAT CTGTGTGGGC GGTCTGTCCG
GCCTGGTCGC CAGCCAGAGC ACAGGAAGAA ATTTTCCGCC TGCAACAGCA AATAAAACAG
TGGGACGATG ACTACTGGAA GGAAGGAAAA AGTGAGGTGG AAGACGGTGT TTACGATCAG
TTAAGCGCCC GTCTTACGCA GTGGCAACGC TGCTTTGTGA GCGAGCCCCG CGACGTGATG
ATGCCGCCTT TAAATGGTGC GGTTATGCAT CCGGTTGCCC ATACGGGTGT ACGCAAAATG
GCGGATAAAA ACGCATTAAG TCTGTGGATG CGAGAACGTA GCGATCTTTG GGTGCAGCCA
AAAGTTGATG GCGTTGCGGT AACCCTGGTT TATCGGGACG GGAAACTGAA CAAAGCAATC
AGTCGCGGTA ATGGCCTGAA AGGCGAGGAC TGGACGCAGA AAGTTAGCTT AATTTCCGCT
GTGCCGCAAA CCGTTAGCGG GCCTTTAGCC AACAGTACGC TTCAGGGGGA AATATTTCTC
CAGCGCGAGG GGCATATCCA ACAACAAATG GGGGGAATAA ATGCCCGCGC AAAAGTTGCT
GGCCTGATGA TGCGCCAGGA CGATAGCGAC ACGCTGAATT CTCTGGGCGT TTTTGTCTGG
GCATGGCCGG ATGGACCGCA GTTAATGACC GATCGTTTAA AGGAGCTGGC TACCGCAGGT
TTTACTCTAA CGCAGAGGTA TACCCGTGCG GTTAAAAATG CTGATGAGGT TGCGCGCGTA
CGCAATGAGT GGTGGAAAGC GAAATTACCC TTCGTCACCG ATGGCGTGGT TGTGCGAGGG
GCGAAAGAAC CCGAATCCCG CCATTGGCTA CCAGGCCAGG CAGAATGGCT GGTGGCCTGG
AAATATCAAC CTGTAGCTCA GGTTGCCAAA GTGAAGGCGA TTCAGTTTGC GGTGGGTAAG
AGCGGTAAAA TATCGGTGGT TGCGTCACTC GCACCTGTCA TGCTGGATGA TAAAAAAGTC
CAGCGGGTGA ATATTGGTTC CGTCAGGCGC TGGCAGGAGT GGGATATTGC GCCTGGTGAT
CAGATCCTCG TCAGCCTTGC CGGTCAGGGT ATTCCTCGCA TTGATGATGT GGTCTGGCGC
GGTGCAGAAC GTACAAAACC GACACCACCA GAAAACCGCT TTAACTCGTT GACCTGCTAC
TTTGCTTCTG ATGTTTGTCA GGAACAGTTC ATTTCACGCT TAGTCTGGCT GGGGTCAAAA
CAGGTTCTGG GGCTGGATGG CATTGGTGAG GCCGGCTGGC GCGCGCTGCA TCAGACTCAT
CGCTTTGAGC ATATCTTTTC CTGGCTTTTA TTAACGCCAG AGCAATTACA GAACACGCCG
GGGATCGCGA AAAGTAAAAG TGCGCAGCTA TGGCATCGGT TTAATCTGGC TCGTAAGCAG
CCTTTTACTC GCTGGGTGAT GGCAATGGGA ATACCGCTAA CCCGGGCGGC GCTTAATGCC
AGTGATGAAC GGTCCTGGTC GCAACTTTTA TTTAGCACGG AGCAGTTCTG GCAGCAGCTG
CCGGGGACTG GATCGGGGCG CGCCAGACAG GTTATTGAAT GGAAGGAAAA TGCGCAAATC
AAGAAGCTGG GCAGTTGGCT GGCTGCCCAG CAGATCACAG GTTTTGAACC TTAG
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| Protein sequence | MPSPRCISAS LTTAEVKMKV WMAILISILC WQSSVWAVCP AWSPARAQEE IFRLQQQIKQ
WDDDYWKEGK SEVEDGVYDQ LSARLTQWQR CFVSEPRDVM MPPLNGAVMH PVAHTGVRKM
ADKNALSLWM RERSDLWVQP KVDGVAVTLV YRDGKLNKAI SRGNGLKGED WTQKVSLISA
VPQTVSGPLA NSTLQGEIFL QREGHIQQQM GGINARAKVA GLMMRQDDSD TLNSLGVFVW
AWPDGPQLMT DRLKELATAG FTLTQRYTRA VKNADEVARV RNEWWKAKLP FVTDGVVVRG
AKEPESRHWL PGQAEWLVAW KYQPVAQVAK VKAIQFAVGK SGKISVVASL APVMLDDKKV
QRVNIGSVRR WQEWDIAPGD QILVSLAGQG IPRIDDVVWR GAERTKPTPP ENRFNSLTCY
FASDVCQEQF ISRLVWLGSK QVLGLDGIGE AGWRALHQTH RFEHIFSWLL LTPEQLQNTP
GIAKSKSAQL WHRFNLARKQ PFTRWVMAMG IPLTRAALNA SDERSWSQLL FSTEQFWQQL
PGTGSGRARQ VIEWKENAQI KKLGSWLAAQ QITGFEP
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