| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5003 |
|---|
| Symbol | waaA |
|---|
| ID | 6967262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 4655503 |
|---|
| End bp | 4656780 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643388684 |
|---|
| Product | 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| Protein accession | YP_002273111 |
|---|
| Protein GI | 209400697 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00137507 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAAT TGCTTTACAC CGCCCTTCTC TACCTTATTC AGCCGCTGAT CTGGATACGG
CTCTGGGTGC GCGGACGTAA GGCTCCGGCC TATCGAAAAC GCTGGGGTGA ACGTTACGGT
TTTTACCGCC ATCCGCTAAA ACCAGGCGGC ATTATGCTGC ACTCCGTCTC CGTCGGTGAA
ACTCTGGCGG CGATCCCGTT GGTGCGCGCG CTGCGTCATC GTTATCCTGA TTTACCTATT
ACCGTAACAA CCATGACGCC AACCGGTTCG GAGCGCGTAC AATCGGCTTT CGGGAAGGAT
GTTCAGCACG TTTATCTGCC GTATGATCTG CCCGATGCAC TCAACCGTTT CCTGAATAAA
GTCGACCCTA AACTGGTGTT GATTATGGAA ACCGAACTAT GGCCTAACCT GATTGCGGCG
CTACATAAAC GTAAAATTCC GCTGGTGATC GCTAACGCGC GACTCTCTGC CCGCTCGGCC
GCAGGTTATG CCAAACTGGG TAAATTCGTC CGTCGCTTGC TGCGTCGTAT TACGCTGATT
GCCGCCCAAA ATGAAGAAGA TGGTGCACGT TTTGTGGCGC TGGGCGCGAA AAATAACCAG
GTAACCGTTA CCGGTAGCCT GAAATTCGAT ATTTCTGTAA CGCCGCAGTT GGCTGCTAAA
GCCGTGACGC TGCGCCGCCA GTGGGCACCA CACCGCCCGG TATGGATTGC CACCAGCACT
CACGAAGGTG AAGAGAGCGT GGTCATTGCC GCACATCAGG CTTTATTACA GCAATTCCCG
AATTTATTGC TCATCCTGGT ACCCCGTCAT CCAGAACGCT TCCCGGATGC GATTAACCTT
GTCCGCCAGG CTGGACTAAG CTATATCACA CGCTCTTCAG GGGAAGTCCC CTCCACCAGC
ACGCAGGTTG TGGTTGGCGA TACGATGGGC GAGTTGATGT TACTGTACGG CATTGCCGAT
CTCGCCTTTG TTGGCGGTTC ACTGGTTGAA CGTGGTGGGC ATAATCCGCT GGAAGCTGCC
GCACACGCAA TTCCGGTATT GATGGGGCCG CATACTTTTA ACTTTAAAGA CATTTGCGCG
CGGCTGGAGC AGGCAAGCGG GCTGATTACC GTTACCGATG CCACTACGCT TGCAAAAGAG
GTTTCCTCTT TACTCACCGA CGCCGATTAC CGTAGTTTCT ATGGCCGTCA TGCCGTTGAA
GTACTGTATC AAAACCAGGG CGCGCTACAG CGTCTGCTTC AACTGCTGGA ACCTTACCTG
CCACCGAAAA CGCATTGA
|
|---|
| Protein sequence | MLELLYTALL YLIQPLIWIR LWVRGRKAPA YRKRWGERYG FYRHPLKPGG IMLHSVSVGE
TLAAIPLVRA LRHRYPDLPI TVTTMTPTGS ERVQSAFGKD VQHVYLPYDL PDALNRFLNK
VDPKLVLIME TELWPNLIAA LHKRKIPLVI ANARLSARSA AGYAKLGKFV RRLLRRITLI
AAQNEEDGAR FVALGAKNNQ VTVTGSLKFD ISVTPQLAAK AVTLRRQWAP HRPVWIATST
HEGEESVVIA AHQALLQQFP NLLLILVPRH PERFPDAINL VRQAGLSYIT RSSGEVPSTS
TQVVVGDTMG ELMLLYGIAD LAFVGGSLVE RGGHNPLEAA AHAIPVLMGP HTFNFKDICA
RLEQASGLIT VTDATTLAKE VSSLLTDADY RSFYGRHAVE VLYQNQGALQ RLLQLLEPYL
PPKTH
|
|---|
| |