Gene ECH74115_4996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4996 
Symbol 
ID6970330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4648149 
End bp4649291 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content37% 
IMG OID643388677 
Productlipopolysaccharide 1,2-N-acetylglucosaminetransferase 
Protein accessionYP_002273104 
Protein GI209400801 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0180671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATA AAATAATATT TACGGTTACT CCTATTTTTT CAATTCCTCC TCGCGGAGCG 
GCTGCTGTTG AAACGTGGAT GTATCAGGTT GCTCAGCGTA CCAATTTTCC AAATCGTATT
GTTTGTATCA AAAATCCAGG ATACTCAAAT TACACCTTTG TTAATGATAA TTGTAGTATT
CATAGGGTTG GATTCAGTCG CATATATAAG CGGTTATTTC AAAAATGGAC AAGACTTGAT
CCTCTTCCAT ATTCACAGAG AATATTGAAT ATTGCACATG ATTTTCCTAT AACGAAAGAA
AGTGTTATTG TAGTTCATAA TAGCATGAAG CTATACACTC AAATTCGTAA GCGAGCTCCT
CAGGCAAGAG TGGTTATACA TATGCATAAT GCATTTGAAC CAAAATTGCT TGAGCAAAAT
GTTAAAATGA TAGTGCCTAG TTTATACTTG AAAAAGTATT ACCAATCTTA TTTAGCAAAT
GCAGATATTG AGATTGTACC AAATGGAATT GATTTAGAAA CCTATCAATC TAATTTTCAG
CCGATCACTA GAAGCGAACT TAATATCTCC CCTGAAGAGA AAATTATTTT TTATGCTGGG
CGTATCGTCC CTGACAAAGG CATATTGCTG TTGATGCAAT CATTCGAAAA ATTGGCCGCT
GCTCACAAAA ATTTAAAATT AGTTGTGATT GGTGATTATA CAGAAATGAG TAAAAGTGAC
AAAGGTGCAT ATCAACGCAA TGTCAGGGAA ATTGCAAAAC GTTTGAAGGA TCGTTGCATT
ATGTTAGGAA GCATACCGCC TGAAAAGATG CATTGTTATT ACCCACTGGC AGATTTAGTC
GTCATTCCTT CCCAGTTCCA GGAACCATTT TGCATGGTGG CAATTGAAGC TATGGGTGCT
GGTAAGCCTG TTTTAGTGAG TACGCGTGGG GGGATGACGG AATTTGTCAA AGAAAATACT
ACGGGATTCC ATTTAAAAGA ACCTATGACT GCAGACTCCA TAAGCAGCGA TATTTTAAAA
ACGTTAGCGA ATCCTGAATT AACAGCAGTT GCAAAGCAAG GTCAGGACTT TGTGTTTGAT
CACTACAGTT GGGATGGCGT AACTCAAAGA TTCGAAGAGG TTATTCATAA TTGGTTTGAA
TAA
 
Protein sequence
MVDKIIFTVT PIFSIPPRGA AAVETWMYQV AQRTNFPNRI VCIKNPGYSN YTFVNDNCSI 
HRVGFSRIYK RLFQKWTRLD PLPYSQRILN IAHDFPITKE SVIVVHNSMK LYTQIRKRAP
QARVVIHMHN AFEPKLLEQN VKMIVPSLYL KKYYQSYLAN ADIEIVPNGI DLETYQSNFQ
PITRSELNIS PEEKIIFYAG RIVPDKGILL LMQSFEKLAA AHKNLKLVVI GDYTEMSKSD
KGAYQRNVRE IAKRLKDRCI MLGSIPPEKM HCYYPLADLV VIPSQFQEPF CMVAIEAMGA
GKPVLVSTRG GMTEFVKENT TGFHLKEPMT ADSISSDILK TLANPELTAV AKQGQDFVFD
HYSWDGVTQR FEEVIHNWFE