| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4992 |
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| Symbol | rfaD |
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| ID | 6969528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4643924 |
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| End bp | 4644856 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643388673 |
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| Product | ADP-L-glycero-D-mannoheptose-6-epimerase |
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| Protein accession | YP_002273100 |
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| Protein GI | 209400532 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000131178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCATCG TTACCGGCGG CGCGGGCTTT ATCGGCAGCA ACATCGTTAA AGCCCTGAAT
GATAAAGGCA TCACCGATAT TCTGGTGGTG GACAACCTGA AAGACGGCAC CAAGTTTGTG
AACCTGGTGG ATCTGAATAT CGCAGACTAT ATGGATAAGG AAGACTTCCT GATCCAGATT
ATGGCTGGCG AAGAGTTCGG CGATGTCGAA GCGATTTTCC ACGAAGGCGC GTGCTCTTCC
ACCACCGAGT GGGACGGCAA GTATATGATG GATAACAACT ATCAATACTC CAAGGAGCTG
CTGCACTACT GCCTGGAGCG TGAAATCCCG TTCCTGTACG CTTCTTCCGC AGCCACCTAC
GGCGGACGCA CCTCCGACTT TATTGAATCC CGCGAGTACG AAAAACCGTT GAACGTCTAC
GGTTACTCAA AATTCCTGTT TGATGAATAT GTTCGCCAAA TCCTGCCGGA AGCGAACTCG
CAGATTGTTG GCTTCCGCTA TTTCAACGTT TATGGACCGC GTGAAGGCCA TAAAGGCAGC
ATGGCGAGCG TCGCTTTCCA TCTCAACACC CAGCTTAATA ACGGTGAATC ACCGAAGCTG
TTCGAAGGTA GCGAGAACTT TAAACGCGAC TTCGTCTATG TTGGCGATGT GGCAGATGTA
AACCTGTGGT TCCTGGAAAA TGGCGTTTCC GGCATCTTCA ACCTCGGCAC CGGTCGTGCG
GAATCCTTCC AGGCTGTAGC TGATGCTACG CTGGCTTATC ACAAGAAAGG CCAGATCGAA
TACATTCCGT TCCCGGATAA GCTGAAAGGC CGCTACCAGG CGTTCACTCA GGCAGATCTG
ACAAATCTGC GCGCGGCGGG TTACGACAAA CCGTTCAAAA CCGTTGCTGA AGGTGTAACG
GAATACATGG CCTGGCTGAA TCGCGACGCA TAA
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| Protein sequence | MIIVTGGAGF IGSNIVKALN DKGITDILVV DNLKDGTKFV NLVDLNIADY MDKEDFLIQI
MAGEEFGDVE AIFHEGACSS TTEWDGKYMM DNNYQYSKEL LHYCLEREIP FLYASSAATY
GGRTSDFIES REYEKPLNVY GYSKFLFDEY VRQILPEANS QIVGFRYFNV YGPREGHKGS
MASVAFHLNT QLNNGESPKL FEGSENFKRD FVYVGDVADV NLWFLENGVS GIFNLGTGRA
ESFQAVADAT LAYHKKGQIE YIPFPDKLKG RYQAFTQADL TNLRAAGYDK PFKTVAEGVT
EYMAWLNRDA
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