| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4987 |
|---|
| Symbol | |
|---|
| ID | 6969058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 4638037 |
|---|
| End bp | 4638996 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643388669 |
|---|
| Product | polysaccharide deacetylase family protein |
|---|
| Protein accession | YP_002273096 |
|---|
| Protein GI | 209399753 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2861] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.184306 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTTCCAT TTCGTCGTAA CGTTCTTGCA TTTGCCGCTC TGTTGGCGCT CTCCTCCCCC
GTACTTGCTG GCAAACTTGC CATCGTCATT GATGATTTTG GGTATCGCCC GCACAACGAA
AACCAGGTGC TGGCGATGCC CTCCGCTATC TCCGTCGCTG TATTACCCGA TTCACCGCAC
GCCAGAGAGA TGGCGACCAA AGCGCATAAC AGCGGGCACG AAGTGTTGAT TCATCTCCCG
ATGGCACCAC TGAGTAAACA GCCGCTGGAG AAAAATACGC TGCGCCCGGA GATGAGCAGC
GACGAAATTG AGCGCATTAT TCGTAGTGCG GTCAATAACG TGCCCTATGC CGTGGGGATC
AACAACCACA TGGGTAGCAA GATGACCTCT AACCTGTTTG GTATGCAGAA AGTGATGCAG
GCACTGGAGC GTTACAATCT TTACTTCCTC GACAGCGTAA CCATCGGTAA TACCCAGGCG
ATGCGCGCCG CGCAAGGTAC TGGCGTGAAG GTGATCAAAC GGAAGGTGTT CCTCGACGAT
TCGCAGAACG AAGCGGACAT CCGTGTGCAA TTTAATCGCG CAATTGATCT GGCGCGTCGC
AACGGTTCAA CCATTGCCAT TGGGCATCCT CACCCTTCAA CGGTACGCGT GCTACAACAG
ATGGTTTATA ACCTGCCGCC AGACATTACG CTGGTGAAAG CCAGCAGCTT GCTGAATGAA
CCGCAGGTTG ATACTTCTAC ACCGCCGAAA AACGCTGTGC CTGATGCACC GCGTAATCCG
TTCCGTGGCG TGAAGCTGTG CAAACCGAAG AAACCGATAG AACCTGTTTA TGCTAATCGC
TTCTTTGAAG TATTAAGCGA AAGCATCAGC CAGAGCACGC TGATCGTTTA CTTCCAGCAT
CAGTGGCAAG GCTGGGGCAA ACAGCCCGAA GCGGCGAAGT TTAACGCTAG CGCAAATTAA
|
|---|
| Protein sequence | MFPFRRNVLA FAALLALSSP VLAGKLAIVI DDFGYRPHNE NQVLAMPSAI SVAVLPDSPH
AREMATKAHN SGHEVLIHLP MAPLSKQPLE KNTLRPEMSS DEIERIIRSA VNNVPYAVGI
NNHMGSKMTS NLFGMQKVMQ ALERYNLYFL DSVTIGNTQA MRAAQGTGVK VIKRKVFLDD
SQNEADIRVQ FNRAIDLARR NGSTIAIGHP HPSTVRVLQQ MVYNLPPDIT LVKASSLLNE
PQVDTSTPPK NAVPDAPRNP FRGVKLCKPK KPIEPVYANR FFEVLSESIS QSTLIVYFQH
QWQGWGKQPE AAKFNASAN
|
|---|
| |