Gene ECH74115_4977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4977 
Symbol 
ID6969727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4629002 
End bp4629778 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content54% 
IMG OID643388659 
ProductDNA-binding transcriptional repressor LldR 
Protein accessionYP_002273086 
Protein GI209395948 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTTT TACCCAGACG CCTGTCAGAC GAGGTTGCCG ATCGTGTGCG GGCGCTGATT 
GATGAAAAAA ACCTGGAAGC GGGCATGAAG TTGCCCGCTG AGCGCCAACT GGCGATGCAA
CTCGGCGTAT CACGTAATTC ACTACGCGAG GCGCTGGCAA AACTGGTGAG CGAAGGCGTG
CTGCTCAGTC GACGCGGCGG CGGGACGTTT ATTCGCTGGC GTCATGACAC ATGGTCGGAG
CAAAACATCG TCCAGCCGCT AAAAACGCTG ATGGCCGATG ATCCGGATTA CAGTTTCGAT
ATTCTGGAAG CCCGCTACGC CATTGAAGCC AGCACCGCAT GGCATGCGGC AATGCGCGCC
ACACCTGGCG ACAAAGAAAA GATTCAGCTT TGCTTTGAAG CAACGCTAAG TGAAGACCCG
GATATCGCCT CACAAGCGGA CGTTCGTTTT CATCTGGCGA TTGCCGAAGC CTCACATAAC
ATCGTGCTGC TGCAAACCAT ACGCGGTTTC TTCGATGTCC TGCAATCCTC AGTGAAGCAT
AGCCGTCAGC GGATGTATCT GGTGCCACCG GTTTTTTCAC AACTGACCGA ACAACATCAG
GCTGTCATTG ACGCCATTTT TGCTGGTGAT GCCGACGGGG CGCGTAAAGC AATGATGGCG
CACCTTAGTT TTGTTCACAC CACCATGAAA CGATTCGATG AAGATCAGGC TCGCCACGCA
CGGATTACCC GCCTGCCCGG TGAGCATAAT GAGCATTCGA GGGAGAAAAA CGCATGA
 
Protein sequence
MIVLPRRLSD EVADRVRALI DEKNLEAGMK LPAERQLAMQ LGVSRNSLRE ALAKLVSEGV 
LLSRRGGGTF IRWRHDTWSE QNIVQPLKTL MADDPDYSFD ILEARYAIEA STAWHAAMRA
TPGDKEKIQL CFEATLSEDP DIASQADVRF HLAIAEASHN IVLLQTIRGF FDVLQSSVKH
SRQRMYLVPP VFSQLTEQHQ AVIDAIFAGD ADGARKAMMA HLSFVHTTMK RFDEDQARHA
RITRLPGEHN EHSREKNA